The top list of academic search engines

academic search engines

1. Google Scholar

4. science.gov, 5. semantic scholar, 6. baidu scholar, get the most out of academic search engines, frequently asked questions about academic search engines, related articles.

Academic search engines have become the number one resource to turn to in order to find research papers and other scholarly sources. While classic academic databases like Web of Science and Scopus are locked behind paywalls, Google Scholar and others can be accessed free of charge. In order to help you get your research done fast, we have compiled the top list of free academic search engines.

Google Scholar is the clear number one when it comes to academic search engines. It's the power of Google searches applied to research papers and patents. It not only lets you find research papers for all academic disciplines for free but also often provides links to full-text PDF files.

  • Coverage: approx. 200 million articles
  • Abstracts: only a snippet of the abstract is available
  • Related articles: ✔
  • References: ✔
  • Cited by: ✔
  • Links to full text: ✔
  • Export formats: APA, MLA, Chicago, Harvard, Vancouver, RIS, BibTeX

Search interface of Google Scholar

BASE is hosted at Bielefeld University in Germany. That is also where its name stems from (Bielefeld Academic Search Engine).

  • Coverage: approx. 136 million articles (contains duplicates)
  • Abstracts: ✔
  • Related articles: ✘
  • References: ✘
  • Cited by: ✘
  • Export formats: RIS, BibTeX

Search interface of Bielefeld Academic Search Engine aka BASE

CORE is an academic search engine dedicated to open-access research papers. For each search result, a link to the full-text PDF or full-text web page is provided.

  • Coverage: approx. 136 million articles
  • Links to full text: ✔ (all articles in CORE are open access)
  • Export formats: BibTeX

Search interface of the CORE academic search engine

Science.gov is a fantastic resource as it bundles and offers free access to search results from more than 15 U.S. federal agencies. There is no need anymore to query all those resources separately!

  • Coverage: approx. 200 million articles and reports
  • Links to full text: ✔ (available for some databases)
  • Export formats: APA, MLA, RIS, BibTeX (available for some databases)

Search interface of Science.gov

Semantic Scholar is the new kid on the block. Its mission is to provide more relevant and impactful search results using AI-powered algorithms that find hidden connections and links between research topics.

  • Coverage: approx. 40 million articles
  • Export formats: APA, MLA, Chicago, BibTeX

Search interface of Semantic Scholar

Although Baidu Scholar's interface is in Chinese, its index contains research papers in English as well as Chinese.

  • Coverage: no detailed statistics available, approx. 100 million articles
  • Abstracts: only snippets of the abstract are available
  • Export formats: APA, MLA, RIS, BibTeX

Search interface of Baidu Scholar

RefSeek searches more than one billion documents from academic and organizational websites. Its clean interface makes it especially easy to use for students and new researchers.

  • Coverage: no detailed statistics available, approx. 1 billion documents
  • Abstracts: only snippets of the article are available
  • Export formats: not available

Search interface of RefSeek

Consider using a reference manager like Paperpile to save, organize, and cite your references. Paperpile integrates with Google Scholar and many popular databases, so you can save references and PDFs directly to your library using the Paperpile buttons:

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Google Scholar is an academic search engine, and it is the clear number one when it comes to academic search engines. It's the power of Google searches applied to research papers and patents. It not only let's you find research papers for all academic disciplines for free, but also often provides links to full text PDF file.

Semantic Scholar is a free, AI-powered research tool for scientific literature developed at the Allen Institute for AI. Sematic Scholar was publicly released in 2015 and uses advances in natural language processing to provide summaries for scholarly papers.

BASE , as its name suggest is an academic search engine. It is hosted at Bielefeld University in Germany and that's where it name stems from (Bielefeld Academic Search Engine).

CORE is an academic search engine dedicated to open access research papers. For each search result a link to the full text PDF or full text web page is provided.

Science.gov is a fantastic resource as it bundles and offers free access to search results from more than 15 U.S. federal agencies. There is no need any more to query all those resources separately!

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How to Write a Research Paper

Use the links below to jump directly to any section of this guide:

Research Paper Fundamentals

How to choose a topic or question, how to create a working hypothesis or thesis, common research paper methodologies, how to gather and organize evidence , how to write an outline for your research paper, how to write a rough draft, how to revise your draft, how to produce a final draft, resources for teachers .

It is not fair to say that no one writes anymore. Just about everyone writes text messages, brief emails, or social media posts every single day. Yet, most people don't have a lot of practice with the formal, organized writing required for a good academic research paper. This guide contains links to a variety of resources that can help demystify the process. Some of these resources are intended for teachers; they contain exercises, activities, and teaching strategies. Other resources are intended for direct use by students who are struggling to write papers, or are looking for tips to make the process go more smoothly.

The resources in this section are designed to help students understand the different types of research papers, the general research process, and how to manage their time. Below, you'll find links from university writing centers, the trusted Purdue Online Writing Lab, and more.

What is an Academic Research Paper?

"Genre and the Research Paper" (Purdue OWL)

There are different types of research papers. Different types of scholarly questions will lend themselves to one format or another. This is a brief introduction to the two main genres of research paper: analytic and argumentative. 

"7 Most Popular Types of Research Papers" (Personal-writer.com)

This resource discusses formats that high school students commonly encounter, such as the compare and contrast essay and the definitional essay. Please note that the inclusion of this link is not an endorsement of this company's paid service.

How to Prepare and Plan Out Writing a Research Paper

Teachers can give their students a step-by-step guide like these to help them understand the different steps of the research paper process. These guides can be combined with the time management tools in the next subsection to help students come up with customized calendars for completing their papers.

"Ten Steps for Writing Research Papers" (American University)  

This resource from American University is a comprehensive guide to the research paper writing process, and includes examples of proper research questions and thesis topics.

"Steps in Writing a Research Paper" (SUNY Empire State College)

This guide breaks the research paper process into 11 steps. Each "step" links to a separate page, which describes the work entailed in completing it.

How to Manage Time Effectively

The links below will help students determine how much time is necessary to complete a paper. If your sources are not available online or at your local library, you'll need to leave extra time for the Interlibrary Loan process. Remember that, even if you do not need to consult secondary sources, you'll still need to leave yourself ample time to organize your thoughts.

"Research Paper Planner: Timeline" (Baylor University)

This interactive resource from Baylor University creates a suggested writing schedule based on how much time a student has to work on the assignment.

"Research Paper Planner" (UCLA)

UCLA's library offers this step-by-step guide to the research paper writing process, which also includes a suggested planning calendar.

There's a reason teachers spend a long time talking about choosing a good topic. Without a good topic and a well-formulated research question, it is almost impossible to write a clear and organized paper. The resources below will help you generate ideas and formulate precise questions.

"How to Select a Research Topic" (Univ. of Michigan-Flint)

This resource is designed for college students who are struggling to come up with an appropriate topic. A student who uses this resource and still feels unsure about his or her topic should consult the course instructor for further personalized assistance.

"25 Interesting Research Paper Topics to Get You Started" (Kibin)

This resource, which is probably most appropriate for high school students, provides a list of specific topics to help get students started. It is broken into subsections, such as "paper topics on local issues."

"Writing a Good Research Question" (Grand Canyon University)

This introduction to research questions includes some embedded videos, as well as links to scholarly articles on research questions. This resource would be most appropriate for teachers who are planning lessons on research paper fundamentals.

"How to Write a Research Question the Right Way" (Kibin)

This student-focused resource provides more detail on writing research questions. The language is accessible, and there are embedded videos and examples of good and bad questions.

It is important to have a rough hypothesis or thesis in mind at the beginning of the research process. People who have a sense of what they want to say will have an easier time sorting through scholarly sources and other information. The key, of course, is not to become too wedded to the draft hypothesis or thesis. Just about every working thesis gets changed during the research process.

CrashCourse Video: "Sociology Research Methods" (YouTube)

Although this video is tailored to sociology students, it is applicable to students in a variety of social science disciplines. This video does a good job demonstrating the connection between the brainstorming that goes into selecting a research question and the formulation of a working hypothesis.

"How to Write a Thesis Statement for an Analytical Essay" (YouTube)

Students writing analytical essays will not develop the same type of working hypothesis as students who are writing research papers in other disciplines. For these students, developing the working thesis may happen as a part of the rough draft (see the relevant section below). 

"Research Hypothesis" (Oakland Univ.)

This resource provides some examples of hypotheses in social science disciplines like Political Science and Criminal Justice. These sample hypotheses may also be useful for students in other soft social sciences and humanities disciplines like History.

When grading a research paper, instructors look for a consistent methodology. This section will help you understand different methodological approaches used in research papers. Students will get the most out of these resources if they use them to help prepare for conversations with teachers or discussions in class.

"Types of Research Designs" (USC)

A "research design," used for complex papers, is related to the paper's method. This resource contains introductions to a variety of popular research designs in the social sciences. Although it is not the most intuitive site to read, the information here is very valuable. 

"Major Research Methods" (YouTube)

Although this video is a bit on the dry side, it provides a comprehensive overview of the major research methodologies in a format that might be more accessible to students who have struggled with textbooks or other written resources.

"Humanities Research Strategies" (USC)

This is a portal where students can learn about four methodological approaches for humanities papers: Historical Methodologies, Textual Criticism, Conceptual Analysis, and the Synoptic method.

"Selected Major Social Science Research Methods: Overview" (National Academies Press)

This appendix from the book  Using Science as Evidence in Public Policy , printed by National Academies Press, introduces some methods used in social science papers.

"Organizing Your Social Sciences Research Paper: 6. The Methodology" (USC)

This resource from the University of Southern California's library contains tips for writing a methodology section in a research paper.

How to Determine the Best Methodology for You

Anyone who is new to writing research papers should be sure to select a method in consultation with their instructor. These resources can be used to help prepare for that discussion. They may also be used on their own by more advanced students.

"Choosing Appropriate Research Methodologies" (Palgrave Study Skills)

This friendly and approachable resource from Palgrave Macmillan can be used by students who are just starting to think about appropriate methodologies.

"How to Choose Your Research Methods" (NFER (UK))

This is another approachable resource students can use to help narrow down the most appropriate methods for their research projects.

The resources in this section introduce the process of gathering scholarly sources and collecting evidence. You'll find a range of material here, from introductory guides to advanced explications best suited to college students. Please consult the LitCharts  How to Do Academic Research guide for a more comprehensive list of resources devoted to finding scholarly literature.

Google Scholar

Students who have access to library websites with detailed research guides should start there, but people who do not have access to those resources can begin their search for secondary literature here.

"Gathering Appropriate Information" (Texas Gateway)

This resource from the Texas Gateway for online resources introduces students to the research process, and contains interactive exercises. The level of complexity is suitable for middle school, high school, and introductory college classrooms.

"An Overview of Quantitative and Qualitative Data Collection Methods" (NSF)

This PDF from the National Science Foundation goes into detail about best practices and pitfalls in data collection across multiple types of methodologies.

"Social Science Methods for Data Collection and Analysis" (Swiss FIT)

This resource is appropriate for advanced undergraduates or teachers looking to create lessons on research design and data collection. It covers techniques for gathering data via interviews, observations, and other methods.

"Collecting Data by In-depth Interviewing" (Leeds Univ.)

This resource contains enough information about conducting interviews to make it useful for teachers who want to create a lesson plan, but is also accessible enough for college juniors or seniors to make use of it on their own.

There is no "one size fits all" outlining technique. Some students might devote all their energy and attention to the outline in order to avoid the paper. Other students may benefit from being made to sit down and organize their thoughts into a lengthy sentence outline. The resources in this section include strategies and templates for multiple types of outlines. 

"Topic vs. Sentence Outlines" (UC Berkeley)

This resource introduces two basic approaches to outlining: the shorter topic-based approach, and the longer, more detailed sentence-based approach. This resource also contains videos on how to develop paper paragraphs from the sentence-based outline.

"Types of Outlines and Samples" (Purdue OWL)

The Purdue Online Writing Lab's guide is a slightly less detailed discussion of different types of outlines. It contains several sample outlines.

"Writing An Outline" (Austin C.C.)

This resource from a community college contains sample outlines from an American history class that students can use as models.

"How to Structure an Outline for a College Paper" (YouTube)

This brief (sub-2 minute) video from the ExpertVillage YouTube channel provides a model of outline writing for students who are struggling with the idea.

"Outlining" (Harvard)

This is a good resource to consult after completing a draft outline. It offers suggestions for making sure your outline avoids things like unnecessary repetition.

As with outlines, rough drafts can take on many different forms. These resources introduce teachers and students to the various approaches to writing a rough draft. This section also includes resources that will help you cite your sources appropriately according to the MLA, Chicago, and APA style manuals.

"Creating a Rough Draft for a Research Paper" (Univ. of Minnesota)

This resource is useful for teachers in particular, as it provides some suggested exercises to help students with writing a basic rough draft. 

Rough Draft Assignment (Duke of Definition)

This sample assignment, with a brief list of tips, was developed by a high school teacher who runs a very successful and well-reviewed page of educational resources.

"Creating the First Draft of Your Research Paper" (Concordia Univ.)

This resource will be helpful for perfectionists or procrastinators, as it opens by discussing the problem of avoiding writing. It also provides a short list of suggestions meant to get students writing.

Using Proper Citations

There is no such thing as a rough draft of a scholarly citation. These links to the three major citation guides will ensure that your citations follow the correct format. Please consult the LitCharts How to Cite Your Sources guide for more resources.

Chicago Manual of Style Citation Guide

Some call  The Chicago Manual of Style , which was first published in 1906, "the editors' Bible." The manual is now in its 17th edition, and is popular in the social sciences, historical journals, and some other fields in the humanities.

APA Citation Guide

According to the American Psychological Association, this guide was developed to aid reading comprehension, clarity of communication, and to reduce bias in language in the social and behavioral sciences. Its first full edition was published in 1952, and it is now in its sixth edition.

MLA Citation Guide

The Modern Language Association style is used most commonly within the liberal arts and humanities. The  MLA Style Manual and Guide to Scholarly Publishing  was first published in 1985 and (as of 2008) is in its third edition.

Any professional scholar will tell you that the best research papers are made in the revision stage. No matter how strong your research question or working thesis, it is not possible to write a truly outstanding paper without devoting energy to revision. These resources provide examples of revision exercises for the classroom, as well as tips for students working independently.

"The Art of Revision" (Univ. of Arizona)

This resource provides a wealth of information and suggestions for both students and teachers. There is a list of suggested exercises that teachers might use in class, along with a revision checklist that is useful for teachers and students alike.

"Script for Workshop on Revision" (Vanderbilt University)

Vanderbilt's guide for leading a 50-minute revision workshop can serve as a model for teachers who wish to guide students through the revision process during classtime. 

"Revising Your Paper" (Univ. of Washington)

This detailed handout was designed for students who are beginning the revision process. It discusses different approaches and methods for revision, and also includes a detailed list of things students should look for while they revise.

"Revising Drafts" (UNC Writing Center)

This resource is designed for students and suggests things to look for during the revision process. It provides steps for the process and has a FAQ for students who have questions about why it is important to revise.

Conferencing with Writing Tutors and Instructors

No writer is so good that he or she can't benefit from meeting with instructors or peer tutors. These resources from university writing, learning, and communication centers provide suggestions for how to get the most out of these one-on-one meetings.

"Getting Feedback" (UNC Writing Center)

This very helpful resource talks about how to ask for feedback during the entire writing process. It contains possible questions that students might ask when developing an outline, during the revision process, and after the final draft has been graded.

"Prepare for Your Tutoring Session" (Otis College of Art and Design)

This guide from a university's student learning center contains a lot of helpful tips for getting the most out of working with a writing tutor.

"The Importance of Asking Your Professor" (Univ. of Waterloo)

This article from the university's Writing and Communication Centre's blog contains some suggestions for how and when to get help from professors and Teaching Assistants.

Once you've revised your first draft, you're well on your way to handing in a polished paper. These resources—each of them produced by writing professionals at colleges and universities—outline the steps required in order to produce a final draft. You'll find proofreading tips and checklists in text and video form.

"Developing a Final Draft of a Research Paper" (Univ. of Minnesota)

While this resource contains suggestions for revision, it also features a couple of helpful checklists for the last stages of completing a final draft.

Basic Final Draft Tips and Checklist (Univ. of Maryland-University College)

This short and accessible resource, part of UMUC's very thorough online guide to writing and research, contains a very basic checklist for students who are getting ready to turn in their final drafts.

Final Draft Checklist (Everett C.C.)

This is another accessible final draft checklist, appropriate for both high school and college students. It suggests reading your essay aloud at least once.

"How to Proofread Your Final Draft" (YouTube)

This video (approximately 5 minutes), produced by Eastern Washington University, gives students tips on proofreading final drafts.

"Proofreading Tips" (Georgia Southern-Armstrong)

This guide will help students learn how to spot common errors in their papers. It suggests focusing on content and editing for grammar and mechanics.

This final set of resources is intended specifically for high school and college instructors. It provides links to unit plans and classroom exercises that can help improve students' research and writing skills. You'll find resources that give an overview of the process, along with activities that focus on how to begin and how to carry out research. 

"Research Paper Complete Resources Pack" (Teachers Pay Teachers)

This packet of assignments, rubrics, and other resources is designed for high school students. The resources in this packet are aligned to Common Core standards.

"Research Paper—Complete Unit" (Teachers Pay Teachers)

This packet of assignments, notes, PowerPoints, and other resources has a 4/4 rating with over 700 ratings. It is designed for high school teachers, but might also be useful to college instructors who work with freshmen.

"Teaching Students to Write Good Papers" (Yale)

This resource from Yale's Center for Teaching and Learning is designed for college instructors, and it includes links to appropriate activities and exercises.

"Research Paper Writing: An Overview" (CUNY Brooklyn)

CUNY Brooklyn offers this complete lesson plan for introducing students to research papers. It includes an accompanying set of PowerPoint slides.

"Lesson Plan: How to Begin Writing a Research Paper" (San Jose State Univ.)

This lesson plan is designed for students in the health sciences, so teachers will have to modify it for their own needs. It includes a breakdown of the brainstorming, topic selection, and research question process. 

"Quantitative Techniques for Social Science Research" (Univ. of Pittsburgh)

This is a set of PowerPoint slides that can be used to introduce students to a variety of quantitative methods used in the social sciences.

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Stop doing your research essay wrong way!

Writing a research paper: devil in details..

Another task from a professor made you devastated and lost? Of course, because it's something that no one likes to do. Especially a young student who obviously have dozens of other important things to do. What task we are talking about? The monotonous and long, time consuming and confusing one. Yes, it's all about writing a research paper! Why students don't like it? Well, let's see.

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Always check your paper.

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  • Published: 16 May 2024

The Egyptian pyramid chain was built along the now abandoned Ahramat Nile Branch

  • Eman Ghoneim   ORCID: orcid.org/0000-0003-3988-0335 1 ,
  • Timothy J. Ralph   ORCID: orcid.org/0000-0002-4956-606X 2 ,
  • Suzanne Onstine 3 ,
  • Raghda El-Behaedi 4 ,
  • Gad El-Qady 5 ,
  • Amr S. Fahil 6 ,
  • Mahfooz Hafez 5 ,
  • Magdy Atya 5 ,
  • Mohamed Ebrahim   ORCID: orcid.org/0000-0002-4068-5628 5 ,
  • Ashraf Khozym 5 &
  • Mohamed S. Fathy 6  

Communications Earth & Environment volume  5 , Article number:  233 ( 2024 ) Cite this article

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  • Archaeology
  • Geomorphology
  • Hydrogeology
  • Sedimentology

The largest pyramid field in Egypt is clustered along a narrow desert strip, yet no convincing explanation as to why these pyramids are concentrated in this specific locality has been given so far. Here we use radar satellite imagery, in conjunction with geophysical data and deep soil coring, to investigate the subsurface structure and sedimentology in the Nile Valley next to these pyramids. We identify segments of a major extinct Nile branch, which we name The Ahramat Branch, running at the foothills of the Western Desert Plateau, where the majority of the pyramids lie. Many of the pyramids, dating to the Old and Middle Kingdoms, have causeways that lead to the branch and terminate with Valley Temples which may have acted as river harbors along it in the past. We suggest that The Ahramat Branch played a role in the monuments’ construction and that it was simultaneously active and used as a transportation waterway for workmen and building materials to the pyramids’ sites.

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Introduction.

The landscape of the northern Nile Valley in Egypt, between Lisht in the south and the Giza Plateau in the north, was subject to a number of environmental and hydrological changes during the past few millennia 1 , 2 . In the Early Holocene (~12,000 years before present), the Sahara of North Africa transformed from a hyper-arid desert to a savannah-like environment, with large river systems and lake basins 3 , 4 due to an increase in global sea level at the end of the Last Glacial Maximum (LGM). The wet conditions of the Sahara provided a suitable habitat for people and wildlife, unlike in the Nile Valley, which was virtually inhospitable to humans because of the constantly higher river levels and swampy environment 5 . At this time, Nile River discharge was high, which is evident from the extensive deposition of organic-rich fluvial sediment in the Eastern Mediterranean basin 6 . Based on the interpretation of archeological material and pollen records, this period, known as the African Humid Period (AHP) (ca. 14,500–5000 years ago), was the most significant and persistent wet period from the early to mid-Holocene in the eastern Sahara region 7 , with an annual rainfall rate of 300–920 mm yr −1   8 . During this time the Nile would have had several secondary channels branching across the floodplain, similar to those described by early historians (e.g., Herodotus).

During the mid-Holocene (~10,000–6000 years ago), freshwater marshes were common within the Nile floodplain causing habitation to be more nucleated along the desert margins of the Nile Valley 9 . The desert margins provided a haven from the high Nile water. With the ending of the AHP and the beginning of the Late Holocene (~5500 years ago to present), rainfall greatly declined, and the region’s humid phase gradually came to an end with punctuated short wet episodes 10 . Due to increased aridity in the Sahara, more people moved out of the desert towards the Nile Valley and settled along the edge of the Nile floodplain. With the reduced precipitation, sedimentation increased in and around the Nile River channels causing the proximal floodplain to rise in height and adjacent marshland to decrease in the area 11 , 12 estimated the Nile flood levels to have ranged from 1 to 4 m above the baseline (~5000 BP). Inhabitants moved downhill to the Nile Valley and settled in the elevated areas on the floodplain, including the raised natural levees of the river and jeziras (islands). This was the beginning of the Old Kingdom Period (ca. 2686 BCE) and the time when early pyramid complexes, including the Step Pyramid of Djoser, were constructed at the margins of the floodplain. During this time the Nile discharge was still considerably higher than its present level. The high flow of the river, particularly during the short-wet intervals, enabled the Nile to maintain multiple branches, which meandered through its floodplain. Although the landscape of the Nile floodplain has greatly transformed due to river regulation associated with the construction of the Aswan High Dam in the 1960s, this region still retains some clear hydro-geomorphological traces of the abandoned river channels.

Since the beginning of the Pharaonic era, the Nile River has played a fundamental role in the rapid growth and expansion of the Egyptian civilization. Serving as their lifeline in a largely arid landscape, the Nile provided sustenance and functioned as the main water corridor that allowed for the transportation of goods and building materials. For this reason, most of the key cities and monuments were in close proximity to the banks of the Nile and its peripheral branches. Over time, however, the main course of the Nile River laterally migrated, and its peripheral branches silted up, leaving behind many ancient Egyptian sites distant from the present-day river course 9 , 13 , 14 , 15 . Yet, it is still unclear as to where exactly the ancient Nile courses were situated 16 , and whether different reaches of the Nile had single or multiple branches that were simultaneously active in the past. Given the lack of consensus amongst scholars regarding this subject, it is imperative to develop a comprehensive understanding of the Nile during the time of the ancient Egyptian civilization. Such a poor understanding of Nile River morphodynamics, particularly in the region that hosts the largest pyramid fields of Egypt, from Lisht to Giza, limits our understanding of how changes in the landscape influenced human activities and settlement patterns in this region, and significantly restricts our ability to understand the daily lives and stories of the ancient Egyptians.

Currently, much of the original surface of the ancient Nile floodplain is masked by either anthropogenic activity or broad silt and sand sheets. For this reason, singular approaches such as on-ground searches for the remains of hidden former Nile branches are both increasingly difficult and inauspicious. A number of studies have already been carried out in Egypt to locate segments of the ancient Nile course. For instance 9 , proposed that the axis of the Nile River ran far west of its modern course past ancient cities such as el-Ashmunein (Hermopolis) 13 . mapped the ancient hydrological landscape in the Luxor area and estimated both an eastward and westward Nile migration rate of 2–3 km per 1000 years. In the Nile Delta region 17 , detected several segments of buried Nile distributaries and elevated mounds using geoelectrical resistivity surveys. Similarly, a study by Bunbury and Lutley 14 identified a segment of an ancient Nile channel, about 5000 years old, near the ancient town of Memphis ( men-nefer ). More recently 15 , used cores taken around Memphis to reveal a section of a lateral ancient Nile branch that was dated to the Neolithic and Predynastic times (ca. 7000–5000 BCE). On the bank of this branch, Memphis, the first capital of unified Egypt, was founded in early Pharaonic times. Over the Dynastic period, this lateral branch then significantly migrated eastwards 15 . A study by Toonen et al. 18 , using borehole data and electrical resistivity tomography, further revealed a segment of an ancient Nile branch, dating to the New Kingdom Period, situated near the desert edge west of Luxor. This river branch would have connected important localities and thus played a significant role in the cultural landscape of this area. More recent research conducted further north by Sheisha et al. 2 , near the Giza Plateau, indicated the presence of a former river and marsh-like environment in the floodplain east of the three great Pyramids of Giza.

Even though the largest concentration of pyramids in Egypt are located along a narrow desert strip from south Lisht to Giza, no explanation has been offered as to why these pyramid fields were condensed in this particular area. Monumental structures, such as pyramids and temples, would logically be built near major waterways to facilitate the transportation of their construction materials and workers. Yet, no waterway has been found near the largest pyramid field in Egypt, with the Nile River lying several kilometers away. Even though many efforts to reconstruct the ancient Nile waterways have been conducted, they have largely been confined to small sites, which has led to the mapping of only fragmented sections of the ancient Nile channel systems.

In this work, we present remote sensing, geomorphological, soil coring and geophysical evidence to support the existence of a long-lost ancient river branch, the Ahramat Branch, and provide the first map of the paleohydrological setting in the Lisht-Giza area. The finding of the Ahramat Branch is not only crucial to our understanding of why the pyramids were built in these specific geographical areas, but also for understanding how the pyramids were accessed and constructed by the ancient population. It has been speculated by many scholars that the ancient Egyptians used the Nile River for help transporting construction materials to pyramid building sites, but until now, this ancient Nile branch was not fully uncovered or mapped. This work can help us better understand the former hydrological setting of this region, which would in turn help us learn more about the environmental parameters that may have influenced the decision to build these pyramids in their current locations during the time of Pharaonic Egypt.

Position and morphology of the Ahramat Branch

Synthetic Aperture Radar (SAR) imagery and radar high-resolution elevation data for the Nile floodplain and its desert margins, between south Lisht and the Giza Plateau area, provide evidence for the existence of segments of a major ancient river branch bordering 31 pyramids dating from the Old Kingdom to Second Intermediate Period (2686−1649 BCE) and spanning between Dynasties 3–13 (Fig.  1a ). This extinct branch is referred to hereafter as the Ahramat Branch, meaning the “Pyramids Branch” in Arabic. Although masked by the cultivated fields of the Nile floodplain, subtle topographic expressions of this former branch, now invisible in optical satellite data, can be traced on the ground surface by TanDEM-X (TDX) radar data and the Topographic Position Index (TPI). Data analysis indicates that this lateral distributary channel lies between 2.5 and 10.25 km west from the modern Nile River. The branch appears to have a surface channel depth between 2 and 8 m, a channel length of about 64 km and a channel width of 200–700 m, which is similar to the width of the contemporary neighboring Nile course. The size and longitudinal continuity of the Ahramat Branch and its proximity to all the pyramids in the study area implies a functional waterway of great significance.

figure 1

a Shows the Ahramat Branch borders a large number of pyramids dating from the Old Kingdom to the 2 nd Intermediate Period and spanning between Dynasties 3 and 13. b Shows Bahr el-Libeini canal and remnant of abandoned channel visible in the 1911 historical map (Egyptian Survey Department scale 1:50,000). c Bahr el-Libeini canal and the abandoned channel are overlain on satellite basemap. Bahr el-Libeini is possibly the last remnant of the Ahramat Branch before it migrated eastward. d A visible segment of the Ahramat Branch in TDX is now partially occupied by the modern Bahr el-Libeini canal. e A major segment of the Ahramat Branch, approximately 20 km long and 0.5 km wide, can be traced in the floodplain along the Western Desert Plateau south of the town of Jirza. Location of e is marked in white a box in a . (ESRI World Image Basemap, source: Esri, Maxar, Earthstar Geographics).

A trace of a 3 km river segment of the Ahramat Branch, with a width of about 260 m, is observable in the floodplain west of the Abu Sir pyramids field (Fig.  1b–d ). Another major segment of the Ahramat Branch, approximately 20 km long and 0.5 km wide can be traced in the floodplain along the Western Desert Plateau south of the town of Jirza (Fig.  1e ). The visible segments of the Ahramat Branch in TDX are now partially occupied by the modern Bahr el-Libeini canal. Such partial overlap between the courses of this canal, traced in the1911 historical maps (Egyptian Survey Department scale 1:50,000), and the Ahramat Branch is clear in areas where the Nile floodplain is narrower (Fig.  1b–d ), while in areas where the floodplain gets wider, the two water courses are about 2 km apart. In light of that, Bahr el-Libeini canal is possibly the last remnant of the Ahramat Branch before it migrated eastward, silted up, and vanished. In the course of the eastward migration over the Nile floodplain, the meandering Ahramat Branch would have left behind traces of abandoned channels (narrow oxbow lakes) which formed as a result of the river erosion through the neck of its meanders. A number of these abandoned channels can be traced in the 1911 historical maps near the foothill of the Western Desert plateau proving the eastward shifting of the branch at this locality (Fig.  1b–d ). The Dahshur Lake, southwest of the city of Dahshur, is most likely the last existing trace of the course of the Ahramat Branch.

Subsurface structure and sedimentology of the Ahramat Branch

Geophysical surveys using Ground Penetrating Radar (GPR) and Electromagnetic Tomography (EMT) along a 1.2 km long profile revealed a hidden river channel lying 1–1.5 m below the cultivated Nile floodplain (Fig.  2 ). The position and shape of this river channel is in an excellent match with those derived from radar satellite imagery for the Ahramat Branch. The EMT profile shows a distinct unconformity in the middle, which in this case indicates sediments that have a different texture than the overlying recent floodplain silt deposits and the sandy sediments that are adjacent to this former branch (Fig.  2 ). GPR overlapping the EMT profile from 600–1100 m on the transect confirms this. Here, we see evidence of an abandoned riverbed approximately 400 m wide and at least 25 m deep (width:depth ratio ~16) at this location. This branch has a symmetrical channel shape and has been infilled with sandy Neonile sediment different to other surrounding Neonile deposits and the underlying Eocene bedrock. The geophysical profile interpretation for the Ahramat Branch at this locality was validated using two sediment cores of depths 20 m (Core A) and 13 m (Core B) (Fig.  3 ). In Core A between the center and left bank of the former branch we found brown sandy mud at the floodplain surface and down to ~2.7 m with some limestone and chert fragments, a reddish sandy mud layer with gravel and handmade material inclusions at ~2.8 m, a gray sandy mud layer from ~3–5.8 m, another reddish sandy mud layer with gravel and freshwater mussel shells at ~6 m, black sandy mud from ~6–8 m, and sandy silt grading into clean, well-sorted medium sand dominated the profile from ~8 to >13 m. In Core B on the right bank of the former branch we found recently deposited brown sandy mud at the floodplain surface and down to ~1.5 m, alternating brown and gray layers of silty and sandy mud down to ~4 m (some reddish layers with gravel and handmade material inclusions), a black sandy mud layer from ~4–4.9 m, and another reddish sandy mud layer with gravel and freshwater mussel shells at ~5 m, before clean, well-sorted medium sand dominated the profile from 5 to >20 m. Shallow groundwater was encountered in both cores concurrently with the sand layers, indicating that the buried sedimentary structure of the abandoned Ahramat Branch acts as a conduit for subsurface water flow beneath the distal floodplain of the modern Nile River.

figure 2

a Locations of geophysical profile and soil drilling (ESRI World Image Basemap, source: Esri, Maxar, Earthstar Geographics). Photos taken from the field while using the b Electromagnetic Tomography (EMT) and c Ground Penetrating Radar (GPR). d Showing the apparent conductivity profile, e showing EMT profile, and f showing GPR profiles with overlain sketch of the channel boundary on the GPR graph. g Simplified interpretation of the buried channel with the location of the two-soil coring of A and B.

figure 3

It shows two-soil cores, A and core B, with soil profile descriptions, graphic core logs, sediment grain size charts, and example photographs.

Alignment of old and middle kingdom pyramids to the Ahramat Branch

The royal pyramids in ancient Egypt are not isolated monuments, but rather joined with several other structures to form complexes. Besides the pyramid itself, the pyramid complex includes the mortuary temple next to the pyramid, a valley temple farther away from the pyramid on the edge of a waterbody, and a long sloping causeway that connects the two temples. A causeway is a ceremonial raised walkway, which provides access to the pyramid site and was part of the religious aspects of the pyramid itself 19 . In the study area, it was found that many of the causeways of the pyramids run perpendicular to the course of the Ahramat Branch and terminate directly on its riverbank.

In Egyptian pyramid complexes, the valley temples at the end of causeways acted as river harbors. These harbors served as an entry point for the river borne visitors and ceremonial roads to the pyramid. Countless valley temples in Egypt have not yet been found and, therefore, might still be buried beneath the agricultural fields and desert sands along the riverbank of the Ahramat Branch. Five of these valley temples, however, partially survived and still exist in the study area. These temples include the valley temples of the Bent Pyramid, the Pyramid of Khafre, and the Pyramid of Menkaure from Dynasty 4; the valley temple of the Pyramid of Sahure from Dynasty 5, and the valley temple of the Pyramid of Pepi II from Dynasty 6. All the aforementioned temples are dated to the Old Kingdom. These five surviving temples were found to be positioned adjacent to the riverbank of the Ahramat Branch, which strongly implies that this river branch was contemporaneously functioning during the Old Kingdom, at the time of pyramid construction.

Analysis of the ground elevation of the 31 pyramids and their proximity to the floodplain, within the study area, helped explain the position and relative water level of the Ahramat Branch during the time between the Old Kingdom and Second Intermediate Period (ca. 2649–1540 BCE). Based on Fig. ( 4) , the Ahramat Branch had a high-water level during the first part of the Old Kingdom, especially during Dynasty 4. This is evident from the high ground elevation and long distance from the floodplain of the pyramids dated to that period. For instance, the remote position of the Bent and Red Pyramids in the desert, very far from the Nile floodplain, is a testament to the branch’s high-water level. On the contrary, during the Old Kingdom, our data demonstrated that the Ahramat Branch would have reached its lowest level during Dynasty 5. This is evident from the low altitudes and close proximity to the floodplain of most Dynasty 5 pyramids. The orientation of the Sahure Pyramid’s causeway (Dynasty 5) and the location of its valley temple in the low-lying floodplain provide compelling evidence for the relatively low water level proposition of the Ahramat Branch during this stage. The water level of the Ahramat Branch would have been slightly raised by the end of Dynasty 5 (the last 15–30 years), during the reign of King Unas and continued to rise during Dynasty 6. The position of Pepi II and Merenre Pyramids (Dynasty 6) deep in the desert, west of the Djedkare Isesi Pyramid (Dynasty 5), supports this notion.

figure 4

It explains the position and relative water level of the Ahramat Branch during the time between the Old Kingdom and Second Intermediate Period. a Shows positive correlation between the ground elevation of the pyramids and their proximity to the floodplain. b Shows positive correlation between the average ground elevation of the pyramids and their average proximity to the floodplain in each Dynasty. c Illustrates the water level interpretation by Hassan (1986) in Faiyum Lake in correlation to the average pyramids ground elevation and average distances to the floodplain in each Dynasty. d The data indicates that the Ahramat Branch had a high-water level during the first period of the Old Kingdom, especially during Dynasty 4. The water level reduced afterwards but was raised slightly in Dynasty 6. The position of the Middle Kingdom’s pyramids, which was at lower altitudes and in close proximity to the floodplain as compared to those of the Old Kingdom might be explained by the slight eastward migration of the Ahramat Branch.

In addition, our analysis in Fig. ( 4) , shows that the Qakare Ibi Pyramid of Dynasty 8 was constructed very close to the floodplain on very low elevation, which implies that the Nile water levels were very low at this time of the First Intermediate Period (2181–2055 BCE). This finding is in agreement with previous work conducted by Kitchen 20 which implies that the sudden collapse of the Old Kingdom in Egypt (after 4160 BCE) was largely caused by catastrophic failure of the annual flood of the Nile River for a period of 30–40 years. Data from soil cores near Memphis indicated that the Old Kingdom settlement is covered by about 3 m of sand 11 . Accordingly, the Ahramat Branch was initially positioned further west during the Old Kingdom and then shifted east during the Middle Kingdom due to the drought-induced sand encroachments of the First Intermediate Period, “a period of decentralization and weak pharaonic rule” in ancient Egypt, spanning about 125 years (2181–2055 BCE) post Old Kingdom era. Soil cores from the drilling program at Memphis show dominant dry conditions during the First Intermediate Period with massive eolian sand sheets extended over a distance of at least 0.5 km from the edge of the western desert escarpment 21 . The Ahramat Branch continued to move east during the Second Intermediate Period until it had gradually lost most of its water supply by the New Kingdom.

The western tributaries of the Ahramat Branch

Sentinal-1 radar data unveiled several wide channels (inlets) in the Western Desert Plateau connected to the Ahramat Branch. These inlets are currently covered by a layer of sand, thus partially invisible in multispectral satellite imagery. In Sentinal-1 radar imagery, the valley floors of these inlets appear darker than the surrounding surfaces, indicating subsurface fluvial deposits. These smooth deposits appear dark owing to the specular reflection of the radar signals away from the receiving antenna (Fig.  5a, b ) 22 . Considering that Sentinel-1’s C-Band has a penetration capability of approximately 50 cm in dry sand surface 23 , this would suggest that the riverbed of these channels is covered by at least half a meter of desert sand. Unlike these former inlets, the course of the Ahramat Branch is invisible in SAR data due in large part to the presence of dense farmlands in the floodplain, which limits radar penetration and the detection of underlying fluvial deposition. Moreover, the radar topographic data from TDX revealed the areal extent of these inlets. Their river courses were extracted from TDX data using the Topographic Position Index (TPI), an algorithm which is used to compute the topographic slope positions and to automate landform classifications (Fig.  5c, d ). Negative TPI values show the former riverbeds of the inlets, while positive TPI signify the riverbanks bordering them.

figure 5

a Conceptual sketch of the dependence of surface roughness on the sensor wavelength λ (modified after 48 ). b Expected backscatter characteristics in sandy desert areas with buried dry riverbeds. c Dry channels/inlets masked by desert sand in the Dahshur area. d The channels’ courses were extracted using TPI. Negative TPI values highlight the courses of the channels while positive TPI signify their banks.

Analysis indicated that several of the pyramid’s causeways, from Dynasties 4 and 6, lead to the inlet’s riverbanks (Fig.  6 ). Among these pyramids, are the Bent Pyramid, the first pyramid built by King Snefru in Dynasty 4 and among the oldest, largest, and best preserved ancient Egyptian pyramids that predates the Giza Pyramids. This pyramid is situated at the royal necropolis of Dahshur. The position of the Bent Pyramid, deep in the desert, far from the modern Nile floodplain, remained unexplained by researchers. This pyramid has a long causeway (~700 m) that is paved in the desert with limestone blocks and is attached to a large valley temple. Although all the pyramids’ valley temples in Egypt are connected to a water body and served as the landing point of all the river-borne visitors, the valley temple of the Bent Pyramid is oddly located deep in the desert, very distant from any waterways and more than 1 km away from the western edge of the modern Nile floodplain. Radar data revealed that this temple overlooked the bank of one of these extinct channels (called Wadi al-Taflah in historical maps). This extinct channel (referred to hereafter as the Dahshur Inlet due to its geographical location) is more than 200 m wide on average (Fig.  6 ). In light of this finding, the Dahshur Inlet, and the Ahramat Branch, are thus strongly argued to have been active during Dynasty 4 and must have played an important role in transporting building materials to the Bent Pyramid site. The Dahshur Inlet could have also served the adjacent Red Pyramid, the second pyramid built by the same king (King Snefru) in the Dahshur area. Yet, no traces of a causeway nor of a valley temple has been found thus far for the Red Pyramid. Interestingly, pyramids in this site dated to the Middle Kingdom, including the Amenemhat III pyramid, also known as the Black Pyramid, White Pyramid, and Pyramid of Senusret III, are all located at least 1 km far to the east of the Dynasty 4 pyramids (Bent and Red) near the floodplain (Fig.  6 ), which once again supports the notion of the eastward shift of the Ahramat Branch after the Old Kingdom.

figure 6

a The two inlets are presently covered by sand, thus invisible in optical satellite imagery. b Radar data, and c TDX topographic data reveal the riverbed of the Sakkara Inlet due to radar signals penetration capability in dry sand. b and c show the causeways of Pepi II and Merenre Pyramids, from Dynasty 6, leading to the Saqqara Inlet. The Valley Temple of Pepi II Pyramid overlooks the inlet riverbank, which indicates that the inlet, and thus Ahramat Branch, were active during Dynasty 6. d Radar data, and e TDX topographic data, reveal the riverbed of the Dahshur Inlet with the Bent Pyramid’s causeway of Dynasty 4 leading to the Inlet. The Valley Temple of the Bent Pyramid overlooks the riverbank of the Dahshur Inlet, which indicates that the inlet and the Ahramat Branch were active during Dynasty 4 of the Old Kingdom.

Radar satellite data revealed yet another sandy buried channel (tributary), about 6 km north of the Dahshur Inlet, to the west of the ancient city of Memphis. This former fluvial channel (referred to hereafter as the Saqqara Inlet due to its geographical location) connects to the Ahramat Branch with a broad river course of more than 600 m wide. Data shows that the causeways of the two pyramids of Pepi II and Merenre, situated at the royal necropolis of Saqqara and dated to Dynasty 6, lead directly to the banks of the Saqqara Inlet (see Fig.  6 ). The 400 m long causeway of Pepi II pyramid runs northeast over the southern Saqqara plateau and connects to the riverbank of the Saqqara Inlet from the south. The causeway terminates with a valley temple that lies on the inlet’s riverbank. The 250 long causeway of the Pyramid of Merenre runs southeast over the northern Saqqara plateau and connects to the riverbank of the Saqqara Inlet from the north. Since both pyramids dated to Dynasty 6, it can be argued that the water level of the Ahramat Branch was higher during this period, which would have flooded at least the entrance of its western inlets. This indicates that the downstream segment of the Saqqara Inlet was active during Dynasty 6 and played a vital role in transporting construction materials and workers to the two pyramids sites. The fact that none of the Dynasty 5 pyramids in this area (e.g., the Djedkare Isesi Pyramid) were positioned on the Saqqara Inlet suggests that the water level in the Ahramat Branch was not high enough to enter and submerge its inlets during this period.

In addition, our data analysis clearly shows that the causeways of the Khafre, Menkaure, and Khentkaus pyramids, in the Giza Plateau, lead to a smaller but equally important river bay associated with the Ahramat Branch. This lagoon-like river arm is referred to here as the Giza Inlet (Fig.  7 ). The Khufu Pyramid, the largest pyramid in Egypt, seems to be connected directly to the river course of the Ahramat Branch (Fig.  7 ). This finding proves once again that the Ahramat Branch and its western inlets were hydrologically active during Dynasty 4 of the Old Kingdom. Our ancient river inlet hypothesis is also in accordance with earlier research, conducted on the Giza Plateau, which indicates the presence of a river and marsh-like environment in the floodplain east of the Giza pyramids 2 .

figure 7

The causeways of the four Pyramids lead to an inlet, which we named the Giza Inlet, that connects from the west with the Ahramat Branch. These causeways connect the pyramids with valley temples which acted as river harbors in antiquity. These river segments are invisible in optical satellite imagery since they are masked by the cultivated lands of the Nile floodplain. The photo shows the valley temple of Khafre Pyramid (Photo source: Author Eman Ghoneim).

During the Old Kingdom Period, our analysis suggests that the Ahramat Branch had a high-water level during the first part, especially during Dynasty 4 whereas this water level was significantly decreased during Dynasty 5. This finding is in agreement with previous studies which indicate a high Nile discharge during Dynasty 4 (e.g., ref. 24 ). Sediment isotopic analysis of the Nile Delta indicated that Nile flows decrease more rapidly by the end of Dynasty 4 25 , in addition 26 reported that during Dynasties 5 and 6 the Nile flows were the lowest of the entire Dynastic period. This long-lost Ahramat Branch (possibly a former Yazoo tributary to the Nile) was large enough to carry a large volume of the Nile discharge in the past. The ancient channel segment uncovered by 1 , 15 west of the city of Memphis through borehole logs is most likely a small section of the large Ahramat Branch detected in this study. In the Middle Kingdom, although previous studies implied that the Nile witnessed abundant flood with occasional failures (e.g., ref. 27 ), our analysis shows that all the pyramids from the Middle Kingdom were built far east of their Old Kingdom counterparts, on lower altitudes and in close proximity to the floodplain as compared to those of the Old Kingdom. This paradox might be explained by the fact that the Ahramat Branch migrated eastward, slightly away from the Western Desert escarpment, prior to the construction of the Middle Kingdom pyramids, resulting in the pyramids being built eastward so that they could be near the waterway.

The eastward migration and abandonment of the Ahramat Branch could be attributed to gradual tilting of the Nile delta and floodplain in lower Egypt towards the northeast due to tectonic activity 28 . A topographic tilt such as this would have accelerated river movement eastward due to the river being located in the west at a relatively higher elevation of the floodplain. While near-channel floodplain deposition would naturally lead to alluvial ridge development around the active Ahramat Branch, and therefore to lower-lying tracts of adjacent floodplain to the east, regional tilting may explain the wholesale lateral migration of the river in that direction. The eastward migration and abandonment of the branch could also be ascribed to sand incursion due to the branch’s proximity to the Western Desert Plateau, where windblown sand is abundant. This would have increased sand deposition along the riverbanks and caused the river to silt up, particularly during periods of low flow. The region experienced drought during the First Intermediate Period, prior to the Middle Kingdom. In the area of Abu Rawash north 29 and Dahshur site 11 , settlements from the Early Dynastic and Old Kingdom were found to be covered by more than 3 m of desert sands. During this time, windblown sand engulfed the Old Kingdom settlements and desert sands extended eastward downhill over a distance of at least 0.5 km 21 . The abandonment of sites at Abusir (5 th Dynasty), where the early pottery-rich deposits are covered by wind-blown sand and then mud without sherds, can be used as evidence that the Ahramat Branch migrated eastward after the Old Kingdom. The increased sand deposition activity, during the end of the Old Kingdom, and throughout the First Intermediate Period, was most likely linked to the period of drought and desertification of the Sahara 30 . In addition, the reduced river discharge caused by decreased rainfall and increased aridity in the region would have gradually reduced the river course’s capacity, leading to silting and abandonment of the Ahramat Branch as the river migrated to the east.

The Dahshur, Saqqara, and Giza inlets, which were connected to the Ahramat Branch from the west, were remnants of past active drainage systems dated to the late Tertiary or the Pleistocene when rainwater was plentiful 31 . It is proposed that the downstream reaches of these former channels (wadis) were submerged during times of high-water levels of the Ahramat Branch, forming long narrow water arms (inlets) that gave a wedge-like shape to the western flank of the Ahramat Branch. During the Old Kingdom, the waters of these inlets would have flowed westward from the Ahramat Branch rather than from their headwaters. As the drought intensified during the First Intermediate Period, the water level of the Ahramat Branch was lowered and withdrew from its western inlets, causing them to silt up and eventually dry out. The Dahshur, Saqqara, and Giza inlets would have provided a bay environment where the water would have been calm enough for vessels and boats to dock far from the busy, open water of the Ahramat Branch.

Sediments from the Ahramat Branch riverbed, which were collected from the two deep soil cores (cores A and B), show an abrupt shift from well-sorted medium sands at depth to overlying finer materials with layers including gravel, shell, and handmade materials. This indicates a step-change from a relatively consistent higher-energy depositional regime to a generally lower-energy depositional regime with periodic flash floods at these sites. So, the Ahramat Branch in this region carried and deposited well-sorted medium sand during its last active phase, and over time became inactive, infilling with sand and mud until an abrupt change led the (by then) shallow depression fill with finer distal floodplain sediment (possibly in a wetland) that was utilized by people and experienced periodic flash flooding. Validation of the paleo-channel position and sediment type using these cores shows that the Ahramat Branch has similar morphological features and an upward-fining depositional sequence as that reported near Giza, where two cores were previously used to reconstruct late Holocene Nile floodplain paleo-environments 2 . Further deep soil coring could determine how consistent the geomorphological features are along the length of the Ahramat branch, and to help explain anomalies in areas where the branch has less surface expression and where remote sensing and geophysical techniques have limitations. Considering more core logs can give a better understanding of the floodplain and the buried paleo-channels.

The position of the Ahramat Branch along the western edge of the Nile floodplain suggests it to be the downstream extension of Bahr Yusef. In fact, Bahr Yusef’s course may have initially flowed north following the natural surface gradient of the floodplain before being forced to turn west to flow into the Fayum Depression. This assumption could be supported by the sharp westward bend of Bahr Yusef’s course at the entrance to the Fayum Depression, which could be a man-made attempt to change the waterflow direction of this branch. According to Römer 32 , during the Middle Kingdom, the Gadallah Dam located at the entrance of the Fayum, and a possible continuation running eastwards, blocked the flow of Bahr Yusef towards the north. However, a sluice, probably located near the village of el-Lahun, was created in order to better control the flow of water into the Fayum. When the sluice was locked, the water from Bahr Yusef was directed to the west and into the depression, and when the sluice was open, the water would flow towards the north via the course of the Ahramat Branch. Today, the abandoned Ahramat Branch north of Fayum appears to support subsurface water flow in the buried coarse sand bed layers, however these shallow groundwater levels are likely to be quite variable due to proximity of the bed layers to canals and other waterways that artificially maintain shallow groundwater. Groundwater levels in the region are known to be variable 33 , but data on shallow groundwater could be used to further validate the delineated paleo-channel of the Ahramat Branch.

The present work enabled the detection of segments of a major former Nile branch running at the foothills of the Western Desert Plateau, where the vast majority of the Ancient Egyptian pyramids lie. The enormity of this branch and its proximity to the pyramid complexes, in addition to the fact that the pyramids’ causeways terminate at its riverbank, all imply that this branch was active and operational during the construction phase of these pyramids. This waterway would have connected important locations in ancient Egypt, including cities and towns, and therefore, played an important role in the cultural landscape of the region. The eastward migration and abandonment of the Ahramat Branch could be attributed to gradual movement of the river to the lower-lying adjacent floodplain or tilting of the Nile floodplain toward the northeast as a result of tectonic activity, as well as windblown sand incursion due to the branch’s proximity to the Western Desert Plateau. The increased sand deposition was most likely related to periods of desertification of the Great Sahara in North Africa. In addition, the branch eastward movement and diminishing could be explained by the reduction of the river discharge and channel capacity caused by the decreased precipitation and increased aridity in the region, particularly during the end of the Old Kingdom.

The integration of radar satellite data with geophysical surveying and soil coring, which we utilized in this study, is a highly adaptable approach in locating similar former buried river systems in arid regions worldwide. Mapping the hidden course of the Ahramat Branch, allowed us to piece together a more complete picture of ancient Egypt’s former landscape and a possible water transportation route in Lower Egypt, in the area between Lisht and the Giza Plateau.

Revealing this extinct Nile branch can provide a more refined idea of where ancient settlements were possibly located in relation to it and prevent them from being lost to rapid urbanization. This could improve the protection measures of Egyptian cultural heritage. It is the hope that our findings can improve conservation measures and raise awareness of these sites for modern development planning. By understanding the landscape of the Nile floodplain and its environmental history, archeologists will be better equipped to prioritize locations for fieldwork investigation and, consequently, raise awareness of these sites for conservation purposes and modern development planning. Our finding has filled a much-needed knowledge gap related to the dominant waterscape in ancient Egypt, which could help inform and educate a wide array of global audiences about how earlier inhabitants were living and in what ways shifts in their landscape drove human activity in such an iconic region.

Materials and methods

The work comprised of two main elements: satellite remote sensing and historical maps and geophysical survey and sediment coring, complemented by archeological resources. Using this suite of investigative techniques provided insights into the nature and relationship of the former Ahramat Branch with the geographical location of the pyramid complexes in Egypt.

Satellite remote sensing and historical maps

Unlike optical sensors that image the land surface, radar sensors image the subsurface due to their unique ability to penetrate the ground and produce images of hidden paleo-rivers and structures. In this context, radar waves strip away the surface sand layer and expose previously unidentified buried channels. The penetration capability of radar waves in the hyper-arid regions of North Africa is well documented 4 , 34 , 35 , 36 , 37 . The penetration depth varies according to the radar wavelength used at the time of imaging. Radar signal penetration becomes possible without significant attenuation if the surface cover material is extremely dry (<1% moisture content), fine grained (<1/5 of the imaging wavelength) and physically homogeneous 23 . When penetrating desert sand, radar signals have the ability to detect subsurface soil roughness, texture, compactness, and dielectric properties 38 . We used the European Space Agency (ESA) Sentinel-1 data, a radar satellite constellation consisting of a C-Band synthetic aperture radar (SAR) sensor, operating at 5.405 GHz. The Sentinel-1 SAR image used here was acquired in a descending orbit with an interferometric wide swath mode (IW) at ground resolutions of 5 m × 20 m, and dual polarizations of VV + VH. Since Sentinal-1 is operated in the C-Band, it has an estimated penetration depth of 50 cm in very dry, sandy, loose soils 39 . We used ENVI v. 5.7 SARscape software for processing radar imagery. The used SAR processing sequences have generated geo-coded, orthorectified, terrain-corrected, noise free, radiometrically calibrated, and normalized Sentinel-1 images with a pixel size of 12.5 m. In SAR imagery subsurface fluvial deposits appear dark owing to specular reflection of the radar signals away from the receiving antenna, whereas buried coarse and compacted material, such as archeological remains appear bright due to diffuse reflection of radar signals 40 .

Other previous studies have shown that combining radar topographic imagery (e.g., Shuttle Radar Topography Mission-SRTM) with SAR images improves the extraction and delineation of mega paleo-drainage systems and lake basins concealed under present-day topographic signatures 3 , 4 , 22 , 41 . Topographic data represents a primary tool in investigating surface landforms and geomorphological change both spatially and temporally. This data is vital in mapping past river systems due to its ability to show subtle variations in landform morphology 37 . In low lying areas, such as the Nile floodplain, detailed elevation data can detect abandoned channels, fossilized natural levees, river meander scars and former islands, which are all crucial elements for reconstructing the ancient Nile hydrological network. In fact, the modern topography in many parts of the study area is still a good analog of the past landscape. In the present study, TanDEM-X (TDX) topographic data, from the German Aerospace Centre (DLR), has been utilized in ArcGIS Pro v. 3.1 software due to its fine spatial resolution of 0.4 arc-second ( ∼ 12 m). TDX is based on high frequency X-Band Synthetic Aperture Radar (SAR) (9.65 GHz) and has a relative vertical accuracy of 2 m for areas with a slope of ≤20% 42 . This data was found to be superior to other topographic DEMs (e.g., Shuttle Radar Topography Mission and ASTER Global Digital Elevation Map) in displaying fine topographic features even in the cultivated Nile floodplain, thus making it particularly well suited for this study. Similar archeological investigations using TDX elevation data in the flat terrains of the Seyhan River in Turkey and the Nile Delta 43 , 44 allowed for the detection of levees and other geomorphologic features in unprecedented spatial resolution. We used the Topographic Position Index (TPI) module of 45 with the TDX data by applying varying neighboring radiuses (20–100 m) to compute the difference between a cell elevation value and the average elevation of the neighborhood around that cell. TPI values of zero are either flat surfaces with minimal slope, or surfaces with a constant gradient. The TPI can be computed using the following expression 46 .

Where the scaleFactor is the outer radius in map units and Irad and Orad are the inner and outer radius of annulus in cells. Negative TPI values highlight abandoned riverbeds and meander scars, while positive TPI signify the riverbanks and natural levees bordering them.

The course of the Ahramat Branch was mapped from multiple data sources and used different approaches. For instance, some segments of the river course were derived automatically using the TPI approach, particularly in the cultivated floodplain, whereas others were mapped using radar roughness signatures specially in sandy desert areas. Moreover, a number of abandoned channel segments were digitized on screen from rectified historical maps (Egyptian Survey Department scale 1:50,000 collected on years 1910–1911) near the foothill of the Western Desert Plateau. These channel segments together with the former river course segments delineated from radar and topographic data were aggregated to generate the former Ahramat Branch. In addition to this and to ensure that none of the channel segments of the Ahramat Branch were left unmapped during the automated process, a systematic grid-based survey (through expert’s visual observation) was performed on the satellite data. Here, Landsat 8 and Sentinal-2 multispectral images, Sentinal-1 radar images and TDX topographic data were used as base layers, which were thoroughly examined, grid-square by grid-square (2*2 km per a square) at a full resolution, in order to identify small-scale fluvial landforms, anomalous agricultural field patterns and irregular ditches, and determine their spatial distributions. Here, ancient fluvial channels were identified using two key aspects: First, the sinuous geometry of natural and manmade features and, second the color tone variations in the satellite imagery. For example, clusters of contiguous pixels with darker tones and sinuous shapes may signify areas of a higher moisture content in optical imagery, and hence the possible existence of a buried riverbed. Stretching and edge detection were applied to enhance contrasts in satellite images brightness to enable the visualization of traces of buried river segments that would otherwise go unobserved. Lastly, all the pyramids and causeways in the study site, along with ancient harbors and valley temples, as indicators of preexisting river channels, were digitized from satellite data and available archeological resources and overlaid onto the delineated Ahramat Branch for geospatial analysis.

Geophysical survey and sediment coring

Geophysical measurements using Ground Penetrating Radar (GPR) and Electromagnetic Tomography (EMT) were utilized to map subsurface fluvial features and validate the satellite remote sensing findings. GPR is effective in detecting changes of dielectric constant properties of sediment layers, and its signal responses can be directly related to changes in relative porosity, material composition, and moisture content. Therefore, GPR can help in identifying transitional boundaries in subsurface layers. EMT, on the other hand, shows the variations and thickness of large-scale sedimentary deposits and is more useful in clay-rich soil than GPR. In summer 2022, a geophysical profile was measured using GPR and EMT units with a total length of approximately 1.2 km. The GPR survey was conducted with a central frequency antenna of 35 MHz and a trigger interval of 5 cm. The EMT survey was performed using the multi-frequency terrain conductivity (EM–34–3) measuring system with a spacing of 10–11 meters between stations. To validate the remote sensing and geophysical data, two sediment cores with depths of 20 m (Core A) and 13 m (Core B) were collected using a deep soil driller. These cores were collected from along the geophysical profile in the floodplain. Sieving and organic analysis were performed on the sediment samples at Tanta University sediment lab to extract information about grain size for soil texture and total organic carbon. In soil texture analysis medium to coarse sediment, such as sands, are typical for river channel sediments, loamy sand and sandy loam deposits can be interpreted as levees and crevasse splays, whereas fine texture deposits, such as silt loam, silty clay loam, and clay deposits, are representative of the more distal parts of the river floodplain 47 .

Data availability

Data for replicating the results of this study are available as supplementary files at: https://figshare.com/articles/journal_contribution/Pyramids_Elevations_and_Distances_xlsx/25216259 .

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Acknowledgements

This work was funded by NSF grant # 2114295 awarded to E.G., S.O. and T.R. and partially supported by Research Momentum Fund, UNCW, to E.G. TanDEM-X data was awarded to E.G. and R.E by the German Aerospace Centre (DLR) (contract # DEM_OTHER2886). Permissions for collecting soil coring and sampling were obtained from the Faculty of Science, Tanta University, Egypt by coauthors Dr. Amr Fhail and Dr. Mohamed Fathy. Bradley Graves at Macquarie University assisted with preparation of the sedimentological figures. Hamada Salama at NRIAG assisted with the GPR field data collection.

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Eman Ghoneim

School of Natural Sciences, Macquarie University, Macquarie, NSW, 2109, Australia

Timothy J. Ralph

Department of History, The University of Memphis, Memphis, TN, 38152-3450, USA

Suzanne Onstine

Near Eastern Languages and Civilizations, University of Chicago, Chicago, IL, 60637, USA

Raghda El-Behaedi

National Research Institute of Astronomy and Geophysics (NRIAG), Helwan, Cairo, 11421, Egypt

Gad El-Qady, Mahfooz Hafez, Magdy Atya, Mohamed Ebrahim & Ashraf Khozym

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Eman Ghoneim conceived the ideas, lead the research project, and conducted the data processing and interpretations. The manuscript was written and prepared by Eman Ghoneim. Timothy J. Ralph co-supervised the project, contributed to the geomorphological and sedimentological interpretations, edited the manuscript and the figures. Suzanne Onstine co-supervised the project, contributed to the archeological and historical interpretations, and edited the manuscript. Raghda El-Behaedi contributed to the remote sensing data processing and methodology and edited the manuscript. Gad El-Qady supervised the geophysical survey. Mahfooz Hafez, Magdy Atya, Mohamed Ebrahim, Ashraf Khozym designed, collected, and interpreted the GPR and EMT data. Amr S. Fahil and Mohamed S. Fathy supervised the soil coring, sediment analysis, drafted sedimentological figures and contributed to the interpretations. All authors reviewed the manuscript and participated in the fieldwork.

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Ghoneim, E., Ralph, T.J., Onstine, S. et al. The Egyptian pyramid chain was built along the now abandoned Ahramat Nile Branch. Commun Earth Environ 5 , 233 (2024). https://doi.org/10.1038/s43247-024-01379-7

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DOI : https://doi.org/10.1038/s43247-024-01379-7

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Cultural Relativity and Acceptance of Embryonic Stem Cell Research

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There is a debate about the ethical implications of using human embryos in stem cell research, which can be influenced by cultural, moral, and social values. This paper argues for an adaptable framework to accommodate diverse cultural and religious perspectives. By using an adaptive ethics model, research protections can reflect various populations and foster growth in stem cell research possibilities.

INTRODUCTION

Stem cell research combines biology, medicine, and technology, promising to alter health care and the understanding of human development. Yet, ethical contention exists because of individuals’ perceptions of using human embryos based on their various cultural, moral, and social values. While these disagreements concerning policy, use, and general acceptance have prompted the development of an international ethics policy, such a uniform approach can overlook the nuanced ethical landscapes between cultures. With diverse viewpoints in public health, a single global policy, especially one reflecting Western ethics or the ethics prevalent in high-income countries, is impractical. This paper argues for a culturally sensitive, adaptable framework for the use of embryonic stem cells. Stem cell policy should accommodate varying ethical viewpoints and promote an effective global dialogue. With an extension of an ethics model that can adapt to various cultures, we recommend localized guidelines that reflect the moral views of the people those guidelines serve.

Stem cells, characterized by their unique ability to differentiate into various cell types, enable the repair or replacement of damaged tissues. Two primary types of stem cells are somatic stem cells (adult stem cells) and embryonic stem cells. Adult stem cells exist in developed tissues and maintain the body’s repair processes. [1] Embryonic stem cells (ESC) are remarkably pluripotent or versatile, making them valuable in research. [2] However, the use of ESCs has sparked ethics debates. Considering the potential of embryonic stem cells, research guidelines are essential. The International Society for Stem Cell Research (ISSCR) provides international stem cell research guidelines. They call for “public conversations touching on the scientific significance as well as the societal and ethical issues raised by ESC research.” [3] The ISSCR also publishes updates about culturing human embryos 14 days post fertilization, suggesting local policies and regulations should continue to evolve as ESC research develops. [4]  Like the ISSCR, which calls for local law and policy to adapt to developing stem cell research given cultural acceptance, this paper highlights the importance of local social factors such as religion and culture.

I.     Global Cultural Perspective of Embryonic Stem Cells

Views on ESCs vary throughout the world. Some countries readily embrace stem cell research and therapies, while others have stricter regulations due to ethical concerns surrounding embryonic stem cells and when an embryo becomes entitled to moral consideration. The philosophical issue of when the “someone” begins to be a human after fertilization, in the morally relevant sense, [5] impacts when an embryo becomes not just worthy of protection but morally entitled to it. The process of creating embryonic stem cell lines involves the destruction of the embryos for research. [6] Consequently, global engagement in ESC research depends on social-cultural acceptability.

a.     US and Rights-Based Cultures

In the United States, attitudes toward stem cell therapies are diverse. The ethics and social approaches, which value individualism, [7] trigger debates regarding the destruction of human embryos, creating a complex regulatory environment. For example, the 1996 Dickey-Wicker Amendment prohibited federal funding for the creation of embryos for research and the destruction of embryos for “more than allowed for research on fetuses in utero.” [8] Following suit, in 2001, the Bush Administration heavily restricted stem cell lines for research. However, the Stem Cell Research Enhancement Act of 2005 was proposed to help develop ESC research but was ultimately vetoed. [9] Under the Obama administration, in 2009, an executive order lifted restrictions allowing for more development in this field. [10] The flux of research capacity and funding parallels the different cultural perceptions of human dignity of the embryo and how it is socially presented within the country’s research culture. [11]

b.     Ubuntu and Collective Cultures

African bioethics differs from Western individualism because of the different traditions and values. African traditions, as described by individuals from South Africa and supported by some studies in other African countries, including Ghana and Kenya, follow the African moral philosophies of Ubuntu or Botho and Ukama , which “advocates for a form of wholeness that comes through one’s relationship and connectedness with other people in the society,” [12] making autonomy a socially collective concept. In this context, for the community to act autonomously, individuals would come together to decide what is best for the collective. Thus, stem cell research would require examining the value of the research to society as a whole and the use of the embryos as a collective societal resource. If society views the source as part of the collective whole, and opposes using stem cells, compromising the cultural values to pursue research may cause social detachment and stunt research growth. [13] Based on local culture and moral philosophy, the permissibility of stem cell research depends on how embryo, stem cell, and cell line therapies relate to the community as a whole . Ubuntu is the expression of humanness, with the person’s identity drawn from the “’I am because we are’” value. [14] The decision in a collectivistic culture becomes one born of cultural context, and individual decisions give deference to others in the society.

Consent differs in cultures where thought and moral philosophy are based on a collective paradigm. So, applying Western bioethical concepts is unrealistic. For one, Africa is a diverse continent with many countries with different belief systems, access to health care, and reliance on traditional or Western medicines. Where traditional medicine is the primary treatment, the “’restrictive focus on biomedically-related bioethics’” [is] problematic in African contexts because it neglects bioethical issues raised by traditional systems.” [15] No single approach applies in all areas or contexts. Rather than evaluating the permissibility of ESC research according to Western concepts such as the four principles approach, different ethics approaches should prevail.

Another consideration is the socio-economic standing of countries. In parts of South Africa, researchers have not focused heavily on contributing to the stem cell discourse, either because it is not considered health care or a health science priority or because resources are unavailable. [16] Each country’s priorities differ given different social, political, and economic factors. In South Africa, for instance, areas such as maternal mortality, non-communicable diseases, telemedicine, and the strength of health systems need improvement and require more focus. [17] Stem cell research could benefit the population, but it also could divert resources from basic medical care. Researchers in South Africa adhere to the National Health Act and Medicines Control Act in South Africa and international guidelines; however, the Act is not strictly enforced, and there is no clear legislation for research conduct or ethical guidelines. [18]

Some parts of Africa condemn stem cell research. For example, 98.2 percent of the Tunisian population is Muslim. [19] Tunisia does not permit stem cell research because of moral conflict with a Fatwa. Religion heavily saturates the regulation and direction of research. [20] Stem cell use became permissible for reproductive purposes only recently, with tight restrictions preventing cells from being used in any research other than procedures concerning ART/IVF.  Their use is conditioned on consent, and available only to married couples. [21] The community's receptiveness to stem cell research depends on including communitarian African ethics.

c.     Asia

Some Asian countries also have a collective model of ethics and decision making. [22] In China, the ethics model promotes a sincere respect for life or human dignity, [23] based on protective medicine. This model, influenced by Traditional Chinese Medicine (TCM), [24] recognizes Qi as the vital energy delivered via the meridians of the body; it connects illness to body systems, the body’s entire constitution, and the universe for a holistic bond of nature, health, and quality of life. [25] Following a protective ethics model, and traditional customs of wholeness, investment in stem cell research is heavily desired for its applications in regenerative therapies, disease modeling, and protective medicines. In a survey of medical students and healthcare practitioners, 30.8 percent considered stem cell research morally unacceptable while 63.5 percent accepted medical research using human embryonic stem cells. Of these individuals, 89.9 percent supported increased funding for stem cell research. [26] The scientific community might not reflect the overall population. From 1997 to 2019, China spent a total of $576 million (USD) on stem cell research at 8,050 stem cell programs, increased published presence from 0.6 percent to 14.01 percent of total global stem cell publications as of 2014, and made significant strides in cell-based therapies for various medical conditions. [27] However, while China has made substantial investments in stem cell research and achieved notable progress in clinical applications, concerns linger regarding ethical oversight and transparency. [28] For example, the China Biosecurity Law, promoted by the National Health Commission and China Hospital Association, attempted to mitigate risks by introducing an institutional review board (IRB) in the regulatory bodies. 5800 IRBs registered with the Chinese Clinical Trial Registry since 2021. [29] However, issues still need to be addressed in implementing effective IRB review and approval procedures.

The substantial government funding and focus on scientific advancement have sometimes overshadowed considerations of regional cultures, ethnic minorities, and individual perspectives, particularly evident during the one-child policy era. As government policy adapts to promote public stability, such as the change from the one-child to the two-child policy, [30] research ethics should also adapt to ensure respect for the values of its represented peoples.

Japan is also relatively supportive of stem cell research and therapies. Japan has a more transparent regulatory framework, allowing for faster approval of regenerative medicine products, which has led to several advanced clinical trials and therapies. [31] South Korea is also actively engaged in stem cell research and has a history of breakthroughs in cloning and embryonic stem cells. [32] However, the field is controversial, and there are issues of scientific integrity. For example, the Korean FDA fast-tracked products for approval, [33] and in another instance, the oocyte source was unclear and possibly violated ethical standards. [34] Trust is important in research, as it builds collaborative foundations between colleagues, trial participant comfort, open-mindedness for complicated and sensitive discussions, and supports regulatory procedures for stakeholders. There is a need to respect the culture’s interest, engagement, and for research and clinical trials to be transparent and have ethical oversight to promote global research discourse and trust.

d.     Middle East

Countries in the Middle East have varying degrees of acceptance of or restrictions to policies related to using embryonic stem cells due to cultural and religious influences. Saudi Arabia has made significant contributions to stem cell research, and conducts research based on international guidelines for ethical conduct and under strict adherence to guidelines in accordance with Islamic principles. Specifically, the Saudi government and people require ESC research to adhere to Sharia law. In addition to umbilical and placental stem cells, [35] Saudi Arabia permits the use of embryonic stem cells as long as they come from miscarriages, therapeutic abortions permissible by Sharia law, or are left over from in vitro fertilization and donated to research. [36] Laws and ethical guidelines for stem cell research allow the development of research institutions such as the King Abdullah International Medical Research Center, which has a cord blood bank and a stem cell registry with nearly 10,000 donors. [37] Such volume and acceptance are due to the ethical ‘permissibility’ of the donor sources, which do not conflict with religious pillars. However, some researchers err on the side of caution, choosing not to use embryos or fetal tissue as they feel it is unethical to do so. [38]

Jordan has a positive research ethics culture. [39] However, there is a significant issue of lack of trust in researchers, with 45.23 percent (38.66 percent agreeing and 6.57 percent strongly agreeing) of Jordanians holding a low level of trust in researchers, compared to 81.34 percent of Jordanians agreeing that they feel safe to participate in a research trial. [40] Safety testifies to the feeling of confidence that adequate measures are in place to protect participants from harm, whereas trust in researchers could represent the confidence in researchers to act in the participants’ best interests, adhere to ethical guidelines, provide accurate information, and respect participants’ rights and dignity. One method to improve trust would be to address communication issues relevant to ESC. Legislation surrounding stem cell research has adopted specific language, especially concerning clarification “between ‘stem cells’ and ‘embryonic stem cells’” in translation. [41] Furthermore, legislation “mandates the creation of a national committee… laying out specific regulations for stem-cell banking in accordance with international standards.” [42] This broad regulation opens the door for future global engagement and maintains transparency. However, these regulations may also constrain the influence of research direction, pace, and accessibility of research outcomes.

e.     Europe

In the European Union (EU), ethics is also principle-based, but the principles of autonomy, dignity, integrity, and vulnerability are interconnected. [43] As such, the opportunity for cohesion and concessions between individuals’ thoughts and ideals allows for a more adaptable ethics model due to the flexible principles that relate to the human experience The EU has put forth a framework in its Convention for the Protection of Human Rights and Dignity of the Human Being allowing member states to take different approaches. Each European state applies these principles to its specific conventions, leading to or reflecting different acceptance levels of stem cell research. [44]

For example, in Germany, Lebenzusammenhang , or the coherence of life, references integrity in the unity of human culture. Namely, the personal sphere “should not be subject to external intervention.” [45]  Stem cell interventions could affect this concept of bodily completeness, leading to heavy restrictions. Under the Grundgesetz, human dignity and the right to life with physical integrity are paramount. [46] The Embryo Protection Act of 1991 made producing cell lines illegal. Cell lines can be imported if approved by the Central Ethics Commission for Stem Cell Research only if they were derived before May 2007. [47] Stem cell research respects the integrity of life for the embryo with heavy specifications and intense oversight. This is vastly different in Finland, where the regulatory bodies find research more permissible in IVF excess, but only up to 14 days after fertilization. [48] Spain’s approach differs still, with a comprehensive regulatory framework. [49] Thus, research regulation can be culture-specific due to variations in applied principles. Diverse cultures call for various approaches to ethical permissibility. [50] Only an adaptive-deliberative model can address the cultural constructions of self and achieve positive, culturally sensitive stem cell research practices. [51]

II.     Religious Perspectives on ESC

Embryonic stem cell sources are the main consideration within religious contexts. While individuals may not regard their own religious texts as authoritative or factual, religion can shape their foundations or perspectives.

The Qur'an states:

“And indeed We created man from a quintessence of clay. Then We placed within him a small quantity of nutfa (sperm to fertilize) in a safe place. Then We have fashioned the nutfa into an ‘alaqa (clinging clot or cell cluster), then We developed the ‘alaqa into mudgha (a lump of flesh), and We made mudgha into bones, and clothed the bones with flesh, then We brought it into being as a new creation. So Blessed is Allah, the Best of Creators.” [52]

Many scholars of Islam estimate the time of soul installment, marked by the angel breathing in the soul to bring the individual into creation, as 120 days from conception. [53] Personhood begins at this point, and the value of life would prohibit research or experimentation that could harm the individual. If the fetus is more than 120 days old, the time ensoulment is interpreted to occur according to Islamic law, abortion is no longer permissible. [54] There are a few opposing opinions about early embryos in Islamic traditions. According to some Islamic theologians, there is no ensoulment of the early embryo, which is the source of stem cells for ESC research. [55]

In Buddhism, the stance on stem cell research is not settled. The main tenets, the prohibition against harming or destroying others (ahimsa) and the pursuit of knowledge (prajña) and compassion (karuna), leave Buddhist scholars and communities divided. [56] Some scholars argue stem cell research is in accordance with the Buddhist tenet of seeking knowledge and ending human suffering. Others feel it violates the principle of not harming others. Finding the balance between these two points relies on the karmic burden of Buddhist morality. In trying to prevent ahimsa towards the embryo, Buddhist scholars suggest that to comply with Buddhist tenets, research cannot be done as the embryo has personhood at the moment of conception and would reincarnate immediately, harming the individual's ability to build their karmic burden. [57] On the other hand, the Bodhisattvas, those considered to be on the path to enlightenment or Nirvana, have given organs and flesh to others to help alleviate grieving and to benefit all. [58] Acceptance varies on applied beliefs and interpretations.

Catholicism does not support embryonic stem cell research, as it entails creation or destruction of human embryos. This destruction conflicts with the belief in the sanctity of life. For example, in the Old Testament, Genesis describes humanity as being created in God’s image and multiplying on the Earth, referencing the sacred rights to human conception and the purpose of development and life. In the Ten Commandments, the tenet that one should not kill has numerous interpretations where killing could mean murder or shedding of the sanctity of life, demonstrating the high value of human personhood. In other books, the theological conception of when life begins is interpreted as in utero, [59] highlighting the inviolability of life and its formation in vivo to make a religious point for accepting such research as relatively limited, if at all. [60] The Vatican has released ethical directives to help apply a theological basis to modern-day conflicts. The Magisterium of the Church states that “unless there is a moral certainty of not causing harm,” experimentation on fetuses, fertilized cells, stem cells, or embryos constitutes a crime. [61] Such procedures would not respect the human person who exists at these stages, according to Catholicism. Damages to the embryo are considered gravely immoral and illicit. [62] Although the Catholic Church officially opposes abortion, surveys demonstrate that many Catholic people hold pro-choice views, whether due to the context of conception, stage of pregnancy, threat to the mother’s life, or for other reasons, demonstrating that practicing members can also accept some but not all tenets. [63]

Some major Jewish denominations, such as the Reform, Conservative, and Reconstructionist movements, are open to supporting ESC use or research as long as it is for saving a life. [64] Within Judaism, the Talmud, or study, gives personhood to the child at birth and emphasizes that life does not begin at conception: [65]

“If she is found pregnant, until the fortieth day it is mere fluid,” [66]

Whereas most religions prioritize the status of human embryos, the Halakah (Jewish religious law) states that to save one life, most other religious laws can be ignored because it is in pursuit of preservation. [67] Stem cell research is accepted due to application of these religious laws.

We recognize that all religions contain subsets and sects. The variety of environmental and cultural differences within religious groups requires further analysis to respect the flexibility of religious thoughts and practices. We make no presumptions that all cultures require notions of autonomy or morality as under the common morality theory , which asserts a set of universal moral norms that all individuals share provides moral reasoning and guides ethical decisions. [68] We only wish to show that the interaction with morality varies between cultures and countries.

III.     A Flexible Ethical Approach

The plurality of different moral approaches described above demonstrates that there can be no universally acceptable uniform law for ESC on a global scale. Instead of developing one standard, flexible ethical applications must be continued. We recommend local guidelines that incorporate important cultural and ethical priorities.

While the Declaration of Helsinki is more relevant to people in clinical trials receiving ESC products, in keeping with the tradition of protections for research subjects, consent of the donor is an ethical requirement for ESC donation in many jurisdictions including the US, Canada, and Europe. [69] The Declaration of Helsinki provides a reference point for regulatory standards and could potentially be used as a universal baseline for obtaining consent prior to gamete or embryo donation.

For instance, in Columbia University’s egg donor program for stem cell research, donors followed standard screening protocols and “underwent counseling sessions that included information as to the purpose of oocyte donation for research, what the oocytes would be used for, the risks and benefits of donation, and process of oocyte stimulation” to ensure transparency for consent. [70] The program helped advance stem cell research and provided clear and safe research methods with paid participants. Though paid participation or covering costs of incidental expenses may not be socially acceptable in every culture or context, [71] and creating embryos for ESC research is illegal in many jurisdictions, Columbia’s program was effective because of the clear and honest communications with donors, IRBs, and related stakeholders.  This example demonstrates that cultural acceptance of scientific research and of the idea that an egg or embryo does not have personhood is likely behind societal acceptance of donating eggs for ESC research. As noted, many countries do not permit the creation of embryos for research.

Proper communication and education regarding the process and purpose of stem cell research may bolster comprehension and garner more acceptance. “Given the sensitive subject material, a complete consent process can support voluntary participation through trust, understanding, and ethical norms from the cultures and morals participants value. This can be hard for researchers entering countries of different socioeconomic stability, with different languages and different societal values. [72]

An adequate moral foundation in medical ethics is derived from the cultural and religious basis that informs knowledge and actions. [73] Understanding local cultural and religious values and their impact on research could help researchers develop humility and promote inclusion.

IV.     Concerns

Some may argue that if researchers all adhere to one ethics standard, protection will be satisfied across all borders, and the global public will trust researchers. However, defining what needs to be protected and how to define such research standards is very specific to the people to which standards are applied. We suggest that applying one uniform guide cannot accurately protect each individual because we all possess our own perceptions and interpretations of social values. [74] Therefore, the issue of not adjusting to the moral pluralism between peoples in applying one standard of ethics can be resolved by building out ethics models that can be adapted to different cultures and religions.

Other concerns include medical tourism, which may promote health inequities. [75] Some countries may develop and approve products derived from ESC research before others, compromising research ethics or drug approval processes. There are also concerns about the sale of unauthorized stem cell treatments, for example, those without FDA approval in the United States. Countries with robust research infrastructures may be tempted to attract medical tourists, and some customers will have false hopes based on aggressive publicity of unproven treatments. [76]

For example, in China, stem cell clinics can market to foreign clients who are not protected under the regulatory regimes. Companies employ a marketing strategy of “ethically friendly” therapies. Specifically, in the case of Beike, China’s leading stem cell tourism company and sprouting network, ethical oversight of administrators or health bureaus at one site has “the unintended consequence of shifting questionable activities to another node in Beike's diffuse network.” [77] In contrast, Jordan is aware of stem cell research’s potential abuse and its own status as a “health-care hub.” Jordan’s expanded regulations include preserving the interests of individuals in clinical trials and banning private companies from ESC research to preserve transparency and the integrity of research practices. [78]

The social priorities of the community are also a concern. The ISSCR explicitly states that guidelines “should be periodically revised to accommodate scientific advances, new challenges, and evolving social priorities.” [79] The adaptable ethics model extends this consideration further by addressing whether research is warranted given the varying degrees of socioeconomic conditions, political stability, and healthcare accessibilities and limitations. An ethical approach would require discussion about resource allocation and appropriate distribution of funds. [80]

While some religions emphasize the sanctity of life from conception, which may lead to public opposition to ESC research, others encourage ESC research due to its potential for healing and alleviating human pain. Many countries have special regulations that balance local views on embryonic personhood, the benefits of research as individual or societal goods, and the protection of human research subjects. To foster understanding and constructive dialogue, global policy frameworks should prioritize the protection of universal human rights, transparency, and informed consent. In addition to these foundational global policies, we recommend tailoring local guidelines to reflect the diverse cultural and religious perspectives of the populations they govern. Ethics models should be adapted to local populations to effectively establish research protections, growth, and possibilities of stem cell research.

For example, in countries with strong beliefs in the moral sanctity of embryos or heavy religious restrictions, an adaptive model can allow for discussion instead of immediate rejection. In countries with limited individual rights and voice in science policy, an adaptive model ensures cultural, moral, and religious views are taken into consideration, thereby building social inclusion. While this ethical consideration by the government may not give a complete voice to every individual, it will help balance policies and maintain the diverse perspectives of those it affects. Embracing an adaptive ethics model of ESC research promotes open-minded dialogue and respect for the importance of human belief and tradition. By actively engaging with cultural and religious values, researchers can better handle disagreements and promote ethical research practices that benefit each society.

This brief exploration of the religious and cultural differences that impact ESC research reveals the nuances of relative ethics and highlights a need for local policymakers to apply a more intense adaptive model.

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[22] Pang M. C. (1999). Protective truthfulness: the Chinese way of safeguarding patients in informed treatment decisions. Journal of medical ethics , 25(3), 247–253. https://doi.org/10.1136/jme.25.3.247

[23] Wang, L., Wang, F., & Zhang, W. (2021). Bioethics in China’s biosecurity law: Forms, effects, and unsettled issues. Journal of law and the biosciences , 8(1).  https://doi.org/10.1093/jlb/lsab019 https://academic.oup.com/jlb/article/8/1/lsab019/6299199

[24] Wang, Y., Xue, Y., & Guo, H. D. (2022). Intervention effects of traditional Chinese medicine on stem cell therapy of myocardial infarction.  Frontiers in pharmacology ,  13 , 1013740. https://doi.org/10.3389/fphar.2022.1013740

[25] Li, X.-T., & Zhao, J. (2012). Chapter 4: An Approach to the Nature of Qi in TCM- Qi and Bioenergy. In Recent Advances in Theories and Practice of Chinese Medicine (p. 79). InTech.

[26] Luo, D., Xu, Z., Wang, Z., & Ran, W. (2021). China's Stem Cell Research and Knowledge Levels of Medical Practitioners and Students.  Stem cells international ,  2021 , 6667743. https://doi.org/10.1155/2021/6667743

[27] Luo, D., Xu, Z., Wang, Z., & Ran, W. (2021). China's Stem Cell Research and Knowledge Levels of Medical Practitioners and Students.  Stem cells international ,  2021 , 6667743. https://doi.org/10.1155/2021/6667743

[28] Zhang, J. Y. (2017). Lost in translation? accountability and governance of Clinical Stem Cell Research in China. Regenerative Medicine , 12 (6), 647–656. https://doi.org/10.2217/rme-2017-0035

[29] Wang, L., Wang, F., & Zhang, W. (2021). Bioethics in China’s biosecurity law: Forms, effects, and unsettled issues. Journal of law and the biosciences , 8(1).  https://doi.org/10.1093/jlb/lsab019 https://academic.oup.com/jlb/article/8/1/lsab019/6299199

[30] Chen, H., Wei, T., Wang, H.  et al.  Association of China’s two-child policy with changes in number of births and birth defects rate, 2008–2017.  BMC Public Health   22 , 434 (2022). https://doi.org/10.1186/s12889-022-12839-0

[31] Azuma, K. Regulatory Landscape of Regenerative Medicine in Japan.  Curr Stem Cell Rep   1 , 118–128 (2015). https://doi.org/10.1007/s40778-015-0012-6

[32] Harris, R. (2005, May 19). Researchers Report Advance in Stem Cell Production . NPR. https://www.npr.org/2005/05/19/4658967/researchers-report-advance-in-stem-cell-production

[33] Park, S. (2012). South Korea steps up stem-cell work.  Nature . https://doi.org/10.1038/nature.2012.10565

[34] Resnik, D. B., Shamoo, A. E., & Krimsky, S. (2006). Fraudulent human embryonic stem cell research in South Korea: lessons learned.  Accountability in research ,  13 (1), 101–109. https://doi.org/10.1080/08989620600634193 .

[35] Alahmad, G., Aljohani, S., & Najjar, M. F. (2020). Ethical challenges regarding the use of stem cells: interviews with researchers from Saudi Arabia. BMC medical ethics, 21(1), 35. https://doi.org/10.1186/s12910-020-00482-6

[36] Association for the Advancement of Blood and Biotherapies.  https://www.aabb.org/regulatory-and-advocacy/regulatory-affairs/regulatory-for-cellular-therapies/international-competent-authorities/saudi-arabia

[37] Alahmad, G., Aljohani, S., & Najjar, M. F. (2020). Ethical challenges regarding the use of stem cells: Interviews with researchers from Saudi Arabia.  BMC medical ethics ,  21 (1), 35. https://doi.org/10.1186/s12910-020-00482-6

[38] Alahmad, G., Aljohani, S., & Najjar, M. F. (2020). Ethical challenges regarding the use of stem cells: Interviews with researchers from Saudi Arabia. BMC medical ethics , 21(1), 35. https://doi.org/10.1186/s12910-020-00482-6

Culturally, autonomy practices follow a relational autonomy approach based on a paternalistic deontological health care model. The adherence to strict international research policies and religious pillars within the regulatory environment is a great foundation for research ethics. However, there is a need to develop locally targeted ethics approaches for research (as called for in Alahmad, G., Aljohani, S., & Najjar, M. F. (2020). Ethical challenges regarding the use of stem cells: interviews with researchers from Saudi Arabia. BMC medical ethics, 21(1), 35. https://doi.org/10.1186/s12910-020-00482-6), this decision-making approach may help advise a research decision model. For more on the clinical cultural autonomy approaches, see: Alabdullah, Y. Y., Alzaid, E., Alsaad, S., Alamri, T., Alolayan, S. W., Bah, S., & Aljoudi, A. S. (2022). Autonomy and paternalism in Shared decision‐making in a Saudi Arabian tertiary hospital: A cross‐sectional study. Developing World Bioethics , 23 (3), 260–268. https://doi.org/10.1111/dewb.12355 ; Bukhari, A. A. (2017). Universal Principles of Bioethics and Patient Rights in Saudi Arabia (Doctoral dissertation, Duquesne University). https://dsc.duq.edu/etd/124; Ladha, S., Nakshawani, S. A., Alzaidy, A., & Tarab, B. (2023, October 26). Islam and Bioethics: What We All Need to Know . Columbia University School of Professional Studies. https://sps.columbia.edu/events/islam-and-bioethics-what-we-all-need-know

[39] Ababneh, M. A., Al-Azzam, S. I., Alzoubi, K., Rababa’h, A., & Al Demour, S. (2021). Understanding and attitudes of the Jordanian public about clinical research ethics.  Research Ethics ,  17 (2), 228-241.  https://doi.org/10.1177/1747016120966779

[40] Ababneh, M. A., Al-Azzam, S. I., Alzoubi, K., Rababa’h, A., & Al Demour, S. (2021). Understanding and attitudes of the Jordanian public about clinical research ethics.  Research Ethics ,  17 (2), 228-241.  https://doi.org/10.1177/1747016120966779

[41] Dajani, R. (2014). Jordan’s stem-cell law can guide the Middle East.  Nature  510, 189. https://doi.org/10.1038/510189a

[42] Dajani, R. (2014). Jordan’s stem-cell law can guide the Middle East.  Nature  510, 189. https://doi.org/10.1038/510189a

[43] The EU’s definition of autonomy relates to the capacity for creating ideas, moral insight, decisions, and actions without constraint, personal responsibility, and informed consent. However, the EU views autonomy as not completely able to protect individuals and depends on other principles, such as dignity, which “expresses the intrinsic worth and fundamental equality of all human beings.” Rendtorff, J.D., Kemp, P. (2019). Four Ethical Principles in European Bioethics and Biolaw: Autonomy, Dignity, Integrity and Vulnerability. In: Valdés, E., Lecaros, J. (eds) Biolaw and Policy in the Twenty-First Century. International Library of Ethics, Law, and the New Medicine, vol 78. Springer, Cham. https://doi.org/10.1007/978-3-030-05903-3_3

[44] Council of Europe. Convention for the protection of Human Rights and Dignity of the Human Being with regard to the Application of Biology and Medicine: Convention on Human Rights and Biomedicine (ETS No. 164) https://www.coe.int/en/web/conventions/full-list?module=treaty-detail&treatynum=164 (forbidding the creation of embryos for research purposes only, and suggests embryos in vitro have protections.); Also see Drabiak-Syed B. K. (2013). New President, New Human Embryonic Stem Cell Research Policy: Comparative International Perspectives and Embryonic Stem Cell Research Laws in France.  Biotechnology Law Report ,  32 (6), 349–356. https://doi.org/10.1089/blr.2013.9865

[45] Rendtorff, J.D., Kemp, P. (2019). Four Ethical Principles in European Bioethics and Biolaw: Autonomy, Dignity, Integrity and Vulnerability. In: Valdés, E., Lecaros, J. (eds) Biolaw and Policy in the Twenty-First Century. International Library of Ethics, Law, and the New Medicine, vol 78. Springer, Cham. https://doi.org/10.1007/978-3-030-05903-3_3

[46] Tomuschat, C., Currie, D. P., Kommers, D. P., & Kerr, R. (Trans.). (1949, May 23). Basic law for the Federal Republic of Germany. https://www.btg-bestellservice.de/pdf/80201000.pdf

[47] Regulation of Stem Cell Research in Germany . Eurostemcell. (2017, April 26). https://www.eurostemcell.org/regulation-stem-cell-research-germany

[48] Regulation of Stem Cell Research in Finland . Eurostemcell. (2017, April 26). https://www.eurostemcell.org/regulation-stem-cell-research-finland

[49] Regulation of Stem Cell Research in Spain . Eurostemcell. (2017, April 26). https://www.eurostemcell.org/regulation-stem-cell-research-spain

[50] Some sources to consider regarding ethics models or regulatory oversights of other cultures not covered:

Kara MA. Applicability of the principle of respect for autonomy: the perspective of Turkey. J Med Ethics. 2007 Nov;33(11):627-30. doi: 10.1136/jme.2006.017400. PMID: 17971462; PMCID: PMC2598110.

Ugarte, O. N., & Acioly, M. A. (2014). The principle of autonomy in Brazil: one needs to discuss it ...  Revista do Colegio Brasileiro de Cirurgioes ,  41 (5), 374–377. https://doi.org/10.1590/0100-69912014005013

Bharadwaj, A., & Glasner, P. E. (2012). Local cells, global science: The rise of embryonic stem cell research in India . Routledge.

For further research on specific European countries regarding ethical and regulatory framework, we recommend this database: Regulation of Stem Cell Research in Europe . Eurostemcell. (2017, April 26). https://www.eurostemcell.org/regulation-stem-cell-research-europe   

[51] Klitzman, R. (2006). Complications of culture in obtaining informed consent. The American Journal of Bioethics, 6(1), 20–21. https://doi.org/10.1080/15265160500394671 see also: Ekmekci, P. E., & Arda, B. (2017). Interculturalism and Informed Consent: Respecting Cultural Differences without Breaching Human Rights.  Cultura (Iasi, Romania) ,  14 (2), 159–172.; For why trust is important in research, see also: Gray, B., Hilder, J., Macdonald, L., Tester, R., Dowell, A., & Stubbe, M. (2017). Are research ethics guidelines culturally competent?  Research Ethics ,  13 (1), 23-41.  https://doi.org/10.1177/1747016116650235

[52] The Qur'an  (M. Khattab, Trans.). (1965). Al-Mu’minun, 23: 12-14. https://quran.com/23

[53] Lenfest, Y. (2017, December 8). Islam and the beginning of human life . Bill of Health. https://blog.petrieflom.law.harvard.edu/2017/12/08/islam-and-the-beginning-of-human-life/

[54] Aksoy, S. (2005). Making regulations and drawing up legislation in Islamic countries under conditions of uncertainty, with special reference to embryonic stem cell research. Journal of Medical Ethics , 31: 399-403.; see also: Mahmoud, Azza. "Islamic Bioethics: National Regulations and Guidelines of Human Stem Cell Research in the Muslim World." Master's thesis, Chapman University, 2022. https://doi.org/10.36837/ chapman.000386

[55] Rashid, R. (2022). When does Ensoulment occur in the Human Foetus. Journal of the British Islamic Medical Association , 12 (4). ISSN 2634 8071. https://www.jbima.com/wp-content/uploads/2023/01/2-Ethics-3_-Ensoulment_Rafaqat.pdf.

[56] Sivaraman, M. & Noor, S. (2017). Ethics of embryonic stem cell research according to Buddhist, Hindu, Catholic, and Islamic religions: perspective from Malaysia. Asian Biomedicine,8(1) 43-52.  https://doi.org/10.5372/1905-7415.0801.260

[57] Jafari, M., Elahi, F., Ozyurt, S. & Wrigley, T. (2007). 4. Religious Perspectives on Embryonic Stem Cell Research. In K. Monroe, R. Miller & J. Tobis (Ed.),  Fundamentals of the Stem Cell Debate: The Scientific, Religious, Ethical, and Political Issues  (pp. 79-94). Berkeley: University of California Press.  https://escholarship.org/content/qt9rj0k7s3/qt9rj0k7s3_noSplash_f9aca2e02c3777c7fb76ea768ba458f0.pdf https://doi.org/10.1525/9780520940994-005

[58] Lecso, P. A. (1991). The Bodhisattva Ideal and Organ Transplantation.  Journal of Religion and Health ,  30 (1), 35–41. http://www.jstor.org/stable/27510629 ; Bodhisattva, S. (n.d.). The Key of Becoming a Bodhisattva . A Guide to the Bodhisattva Way of Life. http://www.buddhism.org/Sutras/2/BodhisattvaWay.htm

[59] There is no explicit religious reference to when life begins or how to conduct research that interacts with the concept of life. However, these are relevant verses pertaining to how the fetus is viewed. (( King James Bible . (1999). Oxford University Press. (original work published 1769))

Jerimiah 1: 5 “Before I formed thee in the belly I knew thee; and before thou camest forth out of the womb I sanctified thee…”

In prophet Jerimiah’s insight, God set him apart as a person known before childbirth, a theme carried within the Psalm of David.

Psalm 139: 13-14 “…Thou hast covered me in my mother's womb. I will praise thee; for I am fearfully and wonderfully made…”

These verses demonstrate David’s respect for God as an entity that would know of all man’s thoughts and doings even before birth.

[60] It should be noted that abortion is not supported as well.

[61] The Vatican. (1987, February 22). Instruction on Respect for Human Life in Its Origin and on the Dignity of Procreation Replies to Certain Questions of the Day . Congregation For the Doctrine of the Faith. https://www.vatican.va/roman_curia/congregations/cfaith/documents/rc_con_cfaith_doc_19870222_respect-for-human-life_en.html

[62] The Vatican. (2000, August 25). Declaration On the Production and the Scientific and Therapeutic Use of Human Embryonic Stem Cells . Pontifical Academy for Life. https://www.vatican.va/roman_curia/pontifical_academies/acdlife/documents/rc_pa_acdlife_doc_20000824_cellule-staminali_en.html ; Ohara, N. (2003). Ethical Consideration of Experimentation Using Living Human Embryos: The Catholic Church’s Position on Human Embryonic Stem Cell Research and Human Cloning. Department of Obstetrics and Gynecology . Retrieved from https://article.imrpress.com/journal/CEOG/30/2-3/pii/2003018/77-81.pdf.

[63] Smith, G. A. (2022, May 23). Like Americans overall, Catholics vary in their abortion views, with regular mass attenders most opposed . Pew Research Center. https://www.pewresearch.org/short-reads/2022/05/23/like-americans-overall-catholics-vary-in-their-abortion-views-with-regular-mass-attenders-most-opposed/

[64] Rosner, F., & Reichman, E. (2002). Embryonic stem cell research in Jewish law. Journal of halacha and contemporary society , (43), 49–68.; Jafari, M., Elahi, F., Ozyurt, S. & Wrigley, T. (2007). 4. Religious Perspectives on Embryonic Stem Cell Research. In K. Monroe, R. Miller & J. Tobis (Ed.),  Fundamentals of the Stem Cell Debate: The Scientific, Religious, Ethical, and Political Issues  (pp. 79-94). Berkeley: University of California Press.  https://escholarship.org/content/qt9rj0k7s3/qt9rj0k7s3_noSplash_f9aca2e02c3777c7fb76ea768ba458f0.pdf https://doi.org/10.1525/9780520940994-005

[65] Schenker J. G. (2008). The beginning of human life: status of embryo. Perspectives in Halakha (Jewish Religious Law).  Journal of assisted reproduction and genetics ,  25 (6), 271–276. https://doi.org/10.1007/s10815-008-9221-6

[66] Ruttenberg, D. (2020, May 5). The Torah of Abortion Justice (annotated source sheet) . Sefaria. https://www.sefaria.org/sheets/234926.7?lang=bi&with=all&lang2=en

[67] Jafari, M., Elahi, F., Ozyurt, S. & Wrigley, T. (2007). 4. Religious Perspectives on Embryonic Stem Cell Research. In K. Monroe, R. Miller & J. Tobis (Ed.),  Fundamentals of the Stem Cell Debate: The Scientific, Religious, Ethical, and Political Issues  (pp. 79-94). Berkeley: University of California Press.  https://escholarship.org/content/qt9rj0k7s3/qt9rj0k7s3_noSplash_f9aca2e02c3777c7fb76ea768ba458f0.pdf https://doi.org/10.1525/9780520940994-005

[68] Gert, B. (2007). Common morality: Deciding what to do . Oxford Univ. Press.

[69] World Medical Association (2013). World Medical Association Declaration of Helsinki: ethical principles for medical research involving human subjects. JAMA , 310(20), 2191–2194. https://doi.org/10.1001/jama.2013.281053 Declaration of Helsinki – WMA – The World Medical Association .; see also: National Commission for the Protection of Human Subjects of Biomedical and Behavioral Research. (1979).  The Belmont report: Ethical principles and guidelines for the protection of human subjects of research . U.S. Department of Health and Human Services.  https://www.hhs.gov/ohrp/regulations-and-policy/belmont-report/read-the-belmont-report/index.html

[70] Zakarin Safier, L., Gumer, A., Kline, M., Egli, D., & Sauer, M. V. (2018). Compensating human subjects providing oocytes for stem cell research: 9-year experience and outcomes.  Journal of assisted reproduction and genetics ,  35 (7), 1219–1225. https://doi.org/10.1007/s10815-018-1171-z https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6063839/ see also: Riordan, N. H., & Paz Rodríguez, J. (2021). Addressing concerns regarding associated costs, transparency, and integrity of research in recent stem cell trial. Stem Cells Translational Medicine , 10 (12), 1715–1716. https://doi.org/10.1002/sctm.21-0234

[71] Klitzman, R., & Sauer, M. V. (2009). Payment of egg donors in stem cell research in the USA.  Reproductive biomedicine online ,  18 (5), 603–608. https://doi.org/10.1016/s1472-6483(10)60002-8

[72] Krosin, M. T., Klitzman, R., Levin, B., Cheng, J., & Ranney, M. L. (2006). Problems in comprehension of informed consent in rural and peri-urban Mali, West Africa.  Clinical trials (London, England) ,  3 (3), 306–313. https://doi.org/10.1191/1740774506cn150oa

[73] Veatch, Robert M.  Hippocratic, Religious, and Secular Medical Ethics: The Points of Conflict . Georgetown University Press, 2012.

[74] Msoroka, M. S., & Amundsen, D. (2018). One size fits not quite all: Universal research ethics with diversity.  Research Ethics ,  14 (3), 1-17.  https://doi.org/10.1177/1747016117739939

[75] Pirzada, N. (2022). The Expansion of Turkey’s Medical Tourism Industry.  Voices in Bioethics ,  8 . https://doi.org/10.52214/vib.v8i.9894

[76] Stem Cell Tourism: False Hope for Real Money . Harvard Stem Cell Institute (HSCI). (2023). https://hsci.harvard.edu/stem-cell-tourism , See also: Bissassar, M. (2017). Transnational Stem Cell Tourism: An ethical analysis.  Voices in Bioethics ,  3 . https://doi.org/10.7916/vib.v3i.6027

[77] Song, P. (2011) The proliferation of stem cell therapies in post-Mao China: problematizing ethical regulation,  New Genetics and Society , 30:2, 141-153, DOI:  10.1080/14636778.2011.574375

[78] Dajani, R. (2014). Jordan’s stem-cell law can guide the Middle East.  Nature  510, 189. https://doi.org/10.1038/510189a

[79] International Society for Stem Cell Research. (2024). Standards in stem cell research . International Society for Stem Cell Research. https://www.isscr.org/guidelines/5-standards-in-stem-cell-research

[80] Benjamin, R. (2013). People’s science bodies and rights on the Stem Cell Frontier . Stanford University Press.

Mifrah Hayath

SM Candidate Harvard Medical School, MS Biotechnology Johns Hopkins University

Olivia Bowers

MS Bioethics Columbia University (Disclosure: affiliated with Voices in Bioethics)

Article Details

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This work is licensed under a Creative Commons Attribution 4.0 International License .

The Streetlight Effect in Data-Driven Exploration

We examine innovative contexts like scientific research or technical R&D where agents must search across many potential projects of varying and uncertain returns. Is it better to possess incomplete but accurate data on the value of some projects, or might there be cases where it is better to explore on a blank slate? While more data usually improves welfare, we present a theoretical framework to understand how it can unexpectedly decrease it. In our model of the streetlight effect, we predict that when data shines a light on attractive but not optimal projects, it can severely narrow the breadth of exploration and lower individual and group payoffs. We test our predictions in an online lab experiment and show that the availability of data on the true value of one project can lower individual payoffs by 17% and reduce the likelihood of discovering the optimal outcome by 54% compared to cases where no data is provided. Suggestive empirical evidence from genetics research illustrates our framework in a real-world setting: data on moderately promising genetic targets delays valuable discoveries by 1.6 years on average. Our paper provides the first systematic examination of the streetlight effect, outlining the conditions under which data leads agents to look under the lamppost rather than engage in socially beneficial exploration.

The first part of the experiment was conducted online via the Toronto Experimental Economics Laboratory in September 2021 and March 2022. The second part of the experiment was conducted online via the Vienna Center for Experimental Economics in July, August, and October 2023. The experiment received approval from the University of Toronto Research Ethics Board (approval #00038482) and was pre-registered at https://osf.io/zs2mu/. We are grateful to Gary Biglaiser, Kevin Bryan, Emeric Henry, Ryan Hill, Riitta Katila, Ramana Nanda, Jean-Robert Tyran and participants at the SIE workshop, the MOM workshop at HBS, the MAD conference at Columbia, the SMS Special Conference at Bocconi, the Strategy Science conference, as well as seminars at BU, GeorgiaTech, Michigan, NBER, Purdue, UC Berkeley, UCLA, and Wharton for their suggestions. We thank Adit Jain for his outstanding help in designing the experimental platform. Eva Chang and Cecil-Francis Brenninkmeijer provided excellent research assistance. All authors contributed equally and are listed in alphabetical order. Corresponding author: [email protected]. The views expressed herein are those of the authors and do not necessarily reflect the views of the National Bureau of Economic Research.

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AlphaFold 3 can predict how DNA, RNA, and other molecules interact, further cementing its leading role in drug discovery and research. Who will benefit?

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Google DeepMind has released an improved version of its biology prediction tool, AlphaFold, that can predict the structures not only of proteins but of nearly all the elements of biological life.

It’s a development that could help accelerate drug discovery and other scientific research. The tool is currently being used to experiment with identifying everything from resilient crops to new vaccines. 

While the previous model, released in 2020, amazed the research community with its ability to predict proteins structures, researchers have been clamoring for the tool to handle more than just proteins. 

Now, DeepMind says, AlphaFold 3 can predict the structures of DNA, RNA, and molecules like ligands, which are essential to drug discovery. DeepMind says the tool provides a more nuanced and dynamic portrait of molecule interactions than anything previously available. 

“Biology is a dynamic system,” DeepMind CEO Demis Hassabis told reporters on a call. “Properties of biology emerge through the interactions between different molecules in the cell, and you can think about AlphaFold 3 as our first big sort of step toward [modeling] that.”

AlphaFold 2 helped us better map the human heart , model antimicrobial resistance , and identify the eggs of extinct birds , but we don’t yet know what advances AlphaFold 3 will bring. 

Mohammed AlQuraishi, an assistant professor of systems biology at Columbia University who is unaffiliated with DeepMind, thinks the new version of the model will be even better for drug discovery. “The AlphaFold 2 system only knew about amino acids, so it was of very limited utility for biopharma,” he says. “But now, the system can in principle predict where a drug binds a protein.”

Isomorphic Labs, a drug discovery spinoff of DeepMind, is already using the model for exactly that purpose, collaborating with pharmaceutical companies to try to develop new treatments for diseases, according to DeepMind. 

AlQuraishi says the release marks a big leap forward. But there are caveats.

“It makes the system much more general, and in particular for drug discovery purposes (in early-stage research), it’s far more useful now than AlphaFold 2,” he says. But as with most models, the impact of AlphaFold will depend on how accurate its predictions are. For some uses, AlphaFold 3 has double the success rate of similar leading models like RoseTTAFold. But for others, like protein-RNA interactions, AlQuraishi says it’s still very inaccurate. 

DeepMind says that depending on the interaction being modeled, accuracy can range from 40% to over 80%, and the model will let researchers know how confident it is in its prediction. With less accurate predictions, researchers have to use AlphaFold merely as a starting point before pursuing other methods. Regardless of these ranges in accuracy, if researchers are trying to take the first steps toward answering a question like which enzymes have the potential to break down the plastic in water bottles, it’s vastly more efficient to use a tool like AlphaFold than experimental techniques such as x-ray crystallography. 

A revamped model  

AlphaFold 3’s larger library of molecules and higher level of complexity required improvements to the underlying model architecture. So DeepMind turned to diffusion techniques, which AI researchers have been steadily improving in recent years and now power image and video generators like OpenAI’s DALL-E 2 and Sora. It works by training a model to start with a noisy image and then reduce that noise bit by bit until an accurate prediction emerges. That method allows AlphaFold 3 to handle a much larger set of inputs.

That marked “a big evolution from the previous model,” says John Jumper, director at Google DeepMind. “It really simplified the whole process of getting all these different atoms to work together.”

It also presented new risks. As the AlphaFold 3 paper details, the use of diffusion techniques made it possible for the model to hallucinate, or generate structures that look plausible but in reality could not exist. Researchers reduced that risk by adding more training data to the areas most prone to hallucination, though that doesn’t eliminate the problem completely. 

Restricted access

Part of AlphaFold 3’s impact will depend on how DeepMind divvies up access to the model. For AlphaFold 2, the company released the open-source code , allowing researchers to look under the hood to gain a better understanding of how it worked. It was also available for all purposes, including commercial use by drugmakers. For AlphaFold 3, Hassabis said, there are no current plans to release the full code. The company is instead releasing a public interface for the model called the AlphaFold Server , which imposes limitations on which molecules can be experimented with and can only be used for noncommercial purposes. DeepMind says the interface will lower the technical barrier and broaden the use of the tool to biologists who are less knowledgeable about this technology.

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Using ideas from game theory to improve the reliability of language models

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A digital illustration featuring two stylized figures engaged in a conversation over a tabletop board game.

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Imagine you and a friend are playing a game where your goal is to communicate secret messages to each other using only cryptic sentences. Your friend's job is to guess the secret message behind your sentences. Sometimes, you give clues directly, and other times, your friend has to guess the message by asking yes-or-no questions about the clues you've given. The challenge is that both of you want to make sure you're understanding each other correctly and agreeing on the secret message.

MIT Computer Science and Artificial Intelligence Laboratory (CSAIL) researchers have created a similar "game" to help improve how AI understands and generates text. It is known as a “consensus game” and it involves two parts of an AI system — one part tries to generate sentences (like giving clues), and the other part tries to understand and evaluate those sentences (like guessing the secret message).

The researchers discovered that by treating this interaction as a game, where both parts of the AI work together under specific rules to agree on the right message, they could significantly improve the AI's ability to give correct and coherent answers to questions. They tested this new game-like approach on a variety of tasks, such as reading comprehension, solving math problems, and carrying on conversations, and found that it helped the AI perform better across the board.

Traditionally, large language models answer one of two ways: generating answers directly from the model (generative querying) or using the model to score a set of predefined answers (discriminative querying), which can lead to differing and sometimes incompatible results. With the generative approach, "Who is the president of the United States?" might yield a straightforward answer like "Joe Biden." However, a discriminative query could incorrectly dispute this fact when evaluating the same answer, such as "Barack Obama."

So, how do we reconcile mutually incompatible scoring procedures to achieve coherent, efficient predictions? 

"Imagine a new way to help language models understand and generate text, like a game. We've developed a training-free, game-theoretic method that treats the whole process as a complex game of clues and signals, where a generator tries to send the right message to a discriminator using natural language. Instead of chess pieces, they're using words and sentences," says Athul Jacob, an MIT PhD student in electrical engineering and computer science and CSAIL affiliate. "Our way to navigate this game is finding the 'approximate equilibria,' leading to a new decoding algorithm called 'equilibrium ranking.' It's a pretty exciting demonstration of how bringing game-theoretic strategies into the mix can tackle some big challenges in making language models more reliable and consistent."

When tested across many tasks, like reading comprehension, commonsense reasoning, math problem-solving, and dialogue, the team's algorithm consistently improved how well these models performed. Using the ER algorithm with the LLaMA-7B model even outshone the results from much larger models. "Given that they are already competitive, that people have been working on it for a while, but the level of improvements we saw being able to outperform a model that's 10 times the size was a pleasant surprise," says Jacob. 

"Diplomacy," a strategic board game set in pre-World War I Europe, where players negotiate alliances, betray friends, and conquer territories without the use of dice — relying purely on skill, strategy, and interpersonal manipulation — recently had a second coming. In November 2022, computer scientists, including Jacob, developed “Cicero,” an AI agent that achieves human-level capabilities in the mixed-motive seven-player game, which requires the same aforementioned skills, but with natural language. The math behind this partially inspired the Consensus Game. 

While the history of AI agents long predates when OpenAI's software entered the chat in November 2022, it's well documented that they can still cosplay as your well-meaning, yet pathological friend. 

The consensus game system reaches equilibrium as an agreement, ensuring accuracy and fidelity to the model's original insights. To achieve this, the method iteratively adjusts the interactions between the generative and discriminative components until they reach a consensus on an answer that accurately reflects reality and aligns with their initial beliefs. This approach effectively bridges the gap between the two querying methods. 

In practice, implementing the consensus game approach to language model querying, especially for question-answering tasks, does involve significant computational challenges. For example, when using datasets like MMLU, which have thousands of questions and multiple-choice answers, the model must apply the mechanism to each query. Then, it must reach a consensus between the generative and discriminative components for every question and its possible answers. 

The system did struggle with a grade school right of passage: math word problems. It couldn't generate wrong answers, which is a critical component of understanding the process of coming up with the right one. 

“The last few years have seen really impressive progress in both strategic decision-making and language generation from AI systems, but we’re just starting to figure out how to put the two together. Equilibrium ranking is a first step in this direction, but I think there’s a lot we’ll be able to do to scale this up to more complex problems,” says Jacob.   

An avenue of future work involves enhancing the base model by integrating the outputs of the current method. This is particularly promising since it can yield more factual and consistent answers across various tasks, including factuality and open-ended generation. The potential for such a method to significantly improve the base model's performance is high, which could result in more reliable and factual outputs from ChatGPT and similar language models that people use daily. 

"Even though modern language models, such as ChatGPT and Gemini, have led to solving various tasks through chat interfaces, the statistical decoding process that generates a response from such models has remained unchanged for decades," says Google Research Scientist Ahmad Beirami, who was not involved in the work. "The proposal by the MIT researchers is an innovative game-theoretic framework for decoding from language models through solving the equilibrium of a consensus game. The significant performance gains reported in the research paper are promising, opening the door to a potential paradigm shift in language model decoding that may fuel a flurry of new applications."

Jacob wrote the paper with MIT-IBM Watson Lab researcher Yikang Shen and MIT Department of Electrical Engineering and Computer Science assistant professors Gabriele Farina and Jacob Andreas, who is also a CSAIL member. They presented their work at the International Conference on Learning Representations (ICLR) earlier this month, where it was highlighted as a "spotlight paper." The research also received a “best paper award” at the NeurIPS R0-FoMo Workshop in December 2023.

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Press mentions, quanta magazine.

MIT researchers have developed a new procedure that uses game theory to improve the accuracy and consistency of large language models (LLMs), reports Steve Nadis for Quanta Magazine . “The new work, which uses games to improve AI, stands in contrast to past approaches, which measured an AI program’s success via its mastery of games,” explains Nadis. 

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Related Links

  • Article: "Game Theory Can Make AI More Correct and Efficient"
  • Jacob Andreas
  • Athul Paul Jacob
  • Language & Intelligence @ MIT
  • Computer Science and Artificial Intelligence Laboratory (CSAIL)
  • Department of Electrical Engineering and Computer Science
  • MIT-IBM Watson AI Lab

Related Topics

  • Computer science and technology
  • Artificial intelligence
  • Human-computer interaction
  • Natural language processing
  • Game theory
  • Electrical Engineering & Computer Science (eecs)

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